312 lines
6.9 KiB
YAML
312 lines
6.9 KiB
YAML
# Only one microscope can be active in the GUI at a time, but all microscopes will be accessible
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microscopes:
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ProjectionScope:
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daq:
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hardware:
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type: NI
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# NI PCIe-1073 Chassis with PXI-6259 and PXI-6733 DAQ Boards.
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# Sampling rate in Hz
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sample_rate: 100000
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# triggers
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master_trigger_out_line: /PCIe-6738/port0/line1
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camera_trigger_out_line: /PCIe-6738/ctr0 #PFI7 Camera trigger
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trigger_source: /PCIe-6738/PFI0
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mirror:
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hardware:
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name: mirror
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type: ImagineOpticsMirror
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flat_path: D:\WaveKitX64\MirrorFiles\BeadsCoverslip_20231212.wcs
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n_modes: 32
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zoom:
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hardware:
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type: SyntheticZoom
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servo_id: 1
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position:
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1x: 0
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pixel_size:
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1x: 0.15
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shutter:
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hardware:
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type: SyntheticShutter
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channel: none/line0
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camera:
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hardware:
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name: camera
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type: HamamatsuOrca
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serial_number: 001301
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defect_correct_mode: 2.0
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delay: 10 #ms
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settle_down: 0.0 #ms
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remote_focus_device:
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hardware:
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type: SyntheticRemoteFocus
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channel: none
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min: 0
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max: 5
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galvo:
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-
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# shear galvo measured: 351.04 um/V
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name: sheargalvo
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hardware:
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type: NI # SyntheticGalvo
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channel: PCIe-6738/ao12
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min: -5
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max: 5
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# waveform: halfsaw
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waveform: sawtooth
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phase: 1.57079
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-
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name: xgalvo
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hardware:
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type: NI # SyntheticGalvo
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channel: PCIe-6738/ao0
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min: -5
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max: 5
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waveform: sawtooth
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phase: 1.57079
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stage:
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hardware:
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-
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name: fake_stage
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type: SyntheticStage
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serial_number: 123
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axes: [x,y,theta,z]
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-
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name: snouty_piezo
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type: GalvoNIStage
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serial_number: 124
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axes: [f]
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axes_mapping: [PCIe-6738/ao14]
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min: 0
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max: 10
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volts_per_micron: (10/15.4)*x + 5.0
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x_max: 50
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x_min: -50
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y_max: 50
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y_min: -50
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z_max: 500
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z_min: -500
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f_max: 100000
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f_min: -100000
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theta_max: 360
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theta_min: 0
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x_offset: 0
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y_offset: 0
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z_offset: 0
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f_offset: 0
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theta_offset: 0
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filter_wheel:
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hardware:
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type: SyntheticFilterWheel
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wheel_number: 1
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port: COM6
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baudrate: 9600
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filter_wheel_delay: .030 # in seconds
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available_filters:
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FRFP - BLP01-664R-25: 0
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RFP - FF01-598/25-25: 1
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GFP - 527/20: 2
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GFPRFP - ZET488/561m: 3
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Empty-Alignment: 4
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Blocked2: 5
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Blocked3: 6
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Blocked4: 7
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Blocked5: 8
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Blocked6: 9
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lasers:
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# Omicron LightHub Ultra
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# 488 and 640 are LuxX+ Lasers
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# 561 is a Coherent OBIS Laser
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# Digital Laser Outputs
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- wavelength: 488
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onoff:
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hardware:
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type: NI
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channel: PCIe-6738/port1/line2
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min: 0
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max: 5
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power:
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hardware:
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type: NI
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channel: PCIe-6738/ao5
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min: 0
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max: 5
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type: Obis
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- wavelength: 561
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onoff:
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hardware:
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type: NI
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channel: PCIe-6738/port1/line3
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min: 0
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max: 5
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power:
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hardware:
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type: NI
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channel: PCIe-6738/ao11
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min: 0
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max: 5
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type: Obis
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StackingScope:
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daq:
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hardware:
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type: NI
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# NI PCIe-1073 Chassis with PXI-6259 and PXI-6733 DAQ Boards.
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# Sampling rate in Hz
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sample_rate: 100000
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# triggers
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master_trigger_out_line: /PCIe-6738/port0/line1
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camera_trigger_out_line: /PCIe-6738/ctr0 #PFI7 Camera trigger
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trigger_source: /PCIe-6738/PFI0
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mirror:
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hardware:
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name: mirror
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type: ImagineOpticsMirror
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flat_path: D:\WaveKitX64\MirrorFiles\BeadsCoverslip_20231212.wcs
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n_modes: 32
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zoom:
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hardware:
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type: SyntheticZoom
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servo_id: 1
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position:
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1x: 0
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pixel_size:
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1x: 0.15
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shutter:
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hardware:
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name: shutter
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type: SyntheticShutter
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channel: none/line0
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camera:
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hardware:
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name: camera
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type: HamamatsuOrca
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serial_number: 001301
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defect_correct_mode: 2.0
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delay: 10 #ms
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remote_focus_device:
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hardware:
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type: SyntheticRemoteFocus
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channel: none
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min: 0
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max: 10
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# Optotune EL-16-40-TC-VIS-5D-1-C
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galvo:
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-
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name: sheargalvo
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hardware:
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type: NI # SyntheticGalvo
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channel: PCIe-6738/ao12
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min: -5
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max: 5
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phase: 1.57079
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stage:
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hardware:
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-
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name: fake_stage
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type: SyntheticStage
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serial_number: 123
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axes: [x,y,theta]
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-
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name: snouty_piezo
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type: GalvoNIStage
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serial_number: 124
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axes: [f]
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axes_mapping: [PCIe-6738/ao14]
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min: 0
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max: 10
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volts_per_micron: (10/15.4)*x + 5.0
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-
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name: z_galvo
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type: GalvoNIStage
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serial_number: 125
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axes: [z]
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# axes_channels: [PCIe-6738/ao0]
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axes_mapping: [PCIe-6738/ao0]
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min: -3.5
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max: 3.5
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volts_per_micron: 0.007*x
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x_max: 50
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x_min: -50
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y_max: 50
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y_min: -50
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z_max: 500
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z_min: -500
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f_max: 100000
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f_min: -100000
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theta_max: 360
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theta_min: 0
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x_offset: 0
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y_offset: 0
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z_offset: 0
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f_offset: 0
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theta_offset: 0
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filter_wheel:
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hardware:
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type: SyntheticFilterWheel
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wheel_number: 1
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port: COM6
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baudrate: 9600
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filter_wheel_delay: .030 # in seconds
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available_filters:
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FRFP - BLP01-664R-25: 0
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RFP - FF01-598/25-25: 1
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GFP - 527/20: 2
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GFPRFP - ZET488/561m: 3
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Empty-Alignment: 4
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Blocked2: 5
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Blocked3: 6
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Blocked4: 7
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Blocked5: 8
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Blocked6: 9
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lasers:
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# Omicron LightHub Ultra
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# 488 and 640 are LuxX+ Lasers
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# 561 is a Coherent OBIS Laser
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# Digital Laser Outputs
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- wavelength: 488
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onoff:
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hardware:
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type: NI
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channel: PCIe-6738/port1/line2
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min: 0
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max: 5
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power:
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hardware:
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type: NI
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channel: PCIe-6738/ao5
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min: 0
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max: 5
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type: Obis
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- wavelength: 561
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onoff:
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hardware:
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type: NI
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channel: PCIe-6738/port1/line3
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min: 0
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max: 5
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power:
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hardware:
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type: NI
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channel: PCIe-6738/ao11
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min: 0
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max: 5
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type: Obis
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gui:
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channels:
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count: 5
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