# Only one microscope can be active in the GUI at a time, but all microscopes will be accessible
microscopes:
  ProjectionScope:
    daq:
      hardware:
        type: NI

      # NI PCIe-1073 Chassis with PXI-6259 and PXI-6733 DAQ Boards.
      # Sampling rate in Hz
      sample_rate: 100000

      # triggers
      master_trigger_out_line: /PCIe-6738/port0/line1
      camera_trigger_out_line: /PCIe-6738/ctr0 #PFI7 Camera trigger
      trigger_source: /PCIe-6738/PFI0

    mirror:
      hardware:
        name: mirror
        type: ImagineOpticsMirror
        flat_path: D:\WaveKitX64\MirrorFiles\BeadsCoverslip_20231212.wcs
      n_modes: 32

    zoom:
      hardware:
        type: SyntheticZoom
        servo_id: 1
      position:
        1x: 0
      pixel_size:
        1x: 0.15
    shutter:
      hardware:
        type: SyntheticShutter
        channel: none/line0
    camera:
      hardware:
        name: camera
        type: HamamatsuOrca
        serial_number: 001301
      defect_correct_mode: 2.0
      delay: 10 #ms
      settle_down: 0.0 #ms
    remote_focus_device:
      hardware:
        type: SyntheticRemoteFocus
        channel: none
        min: 0
        max: 5
    galvo:
      -
        # shear galvo measured: 351.04 um/V
        name: sheargalvo
        hardware:
          type: NI # SyntheticGalvo
          channel: PCIe-6738/ao12
          min: -5
          max: 5
        # waveform: halfsaw
        waveform: sawtooth
        phase: 1.57079
      -
        name: xgalvo
        hardware:
          type: NI # SyntheticGalvo
          channel: PCIe-6738/ao0
          min: -5
          max: 5
        waveform: sawtooth
        phase: 1.57079
    stage:
      hardware:
        -
          name: fake_stage
          type: SyntheticStage
          serial_number: 123
          axes: [x,y,theta,z]
        -
          name: snouty_piezo
          type: GalvoNIStage
          serial_number: 124
          axes: [f]
          axes_mapping: [PCIe-6738/ao14]
          min: 0
          max: 10
          volts_per_micron: (10/15.4)*x + 5.0

      x_max: 50
      x_min: -50
      y_max: 50
      y_min: -50
      z_max: 500
      z_min: -500
      f_max: 100000
      f_min: -100000
      theta_max: 360
      theta_min: 0

      x_offset: 0
      y_offset: 0
      z_offset: 0
      f_offset: 0
      theta_offset: 0
    filter_wheel:
      hardware:
        type: SyntheticFilterWheel
        wheel_number: 1
        port: COM6
        baudrate: 9600
      filter_wheel_delay: .030 # in seconds
      available_filters:
        FRFP - BLP01-664R-25: 0
        RFP - FF01-598/25-25: 1
        GFP - 527/20: 2
        GFPRFP - ZET488/561m: 3
        Empty-Alignment: 4
        Blocked2: 5
        Blocked3: 6
        Blocked4: 7
        Blocked5: 8
        Blocked6: 9
    lasers:
      # Omicron LightHub Ultra
      # 488 and 640 are LuxX+ Lasers
      # 561 is a Coherent OBIS Laser
      # Digital Laser Outputs
      - wavelength: 488
        onoff:
          hardware:
            type: NI
            channel: PCIe-6738/port1/line2
            min: 0
            max: 5
        power:
          hardware:
            type: NI
            channel: PCIe-6738/ao5
            min: 0
            max: 5
        type: Obis
      - wavelength: 561
        onoff:
          hardware:
            type: NI
            channel: PCIe-6738/port1/line3
            min: 0
            max: 5
        power:
          hardware:
            type: NI
            channel: PCIe-6738/ao11
            min: 0
            max: 5
        type: Obis

  StackingScope:
    daq:
      hardware:
        type: NI

      # NI PCIe-1073 Chassis with PXI-6259 and PXI-6733 DAQ Boards.
      # Sampling rate in Hz
      sample_rate: 100000

      # triggers
      master_trigger_out_line: /PCIe-6738/port0/line1
      camera_trigger_out_line: /PCIe-6738/ctr0 #PFI7 Camera trigger
      trigger_source: /PCIe-6738/PFI0

    mirror:
      hardware:
        name: mirror
        type: ImagineOpticsMirror
        flat_path: D:\WaveKitX64\MirrorFiles\BeadsCoverslip_20231212.wcs
      n_modes: 32

    zoom:
      hardware:
        type: SyntheticZoom
        servo_id: 1
      position:
        1x: 0
      pixel_size:
        1x: 0.15
    shutter:
      hardware:
        name: shutter
        type: SyntheticShutter
        channel: none/line0
    camera:
      hardware:
        name: camera
        type: HamamatsuOrca
        serial_number: 001301
      defect_correct_mode: 2.0
      delay: 10 #ms

    remote_focus_device:
      hardware:
        type: SyntheticRemoteFocus
        channel: none
        min: 0
        max: 10
      # Optotune EL-16-40-TC-VIS-5D-1-C
    galvo:
      -
        name: sheargalvo
        hardware:
          type: NI # SyntheticGalvo
          channel: PCIe-6738/ao12
          min: -5
          max: 5
        phase: 1.57079
    stage:
      hardware:
        -
          name: fake_stage
          type: SyntheticStage
          serial_number: 123
          axes: [x,y,theta]
        -
          name: snouty_piezo
          type: GalvoNIStage
          serial_number: 124
          axes: [f]
          axes_mapping: [PCIe-6738/ao14]
          min: 0
          max: 10
          volts_per_micron: (10/15.4)*x + 5.0
        -
          name: z_galvo
          type: GalvoNIStage
          serial_number: 125
          axes: [z]
          # axes_channels: [PCIe-6738/ao0]
          axes_mapping: [PCIe-6738/ao0]
          min: -3.5
          max: 3.5
          volts_per_micron: 0.007*x

      x_max: 50
      x_min: -50
      y_max: 50
      y_min: -50
      z_max: 500
      z_min: -500
      f_max: 100000
      f_min: -100000
      theta_max: 360
      theta_min: 0

      x_offset: 0
      y_offset: 0
      z_offset: 0
      f_offset: 0
      theta_offset: 0
    filter_wheel:
      hardware:
        type: SyntheticFilterWheel
        wheel_number: 1
        port: COM6
        baudrate: 9600
      filter_wheel_delay: .030 # in seconds
      available_filters:
        FRFP - BLP01-664R-25: 0
        RFP - FF01-598/25-25: 1
        GFP - 527/20: 2
        GFPRFP - ZET488/561m: 3
        Empty-Alignment: 4
        Blocked2: 5
        Blocked3: 6
        Blocked4: 7
        Blocked5: 8
        Blocked6: 9
    lasers:
      # Omicron LightHub Ultra
      # 488 and 640 are LuxX+ Lasers
      # 561 is a Coherent OBIS Laser
      # Digital Laser Outputs
      - wavelength: 488
        onoff:
          hardware:
            type: NI
            channel: PCIe-6738/port1/line2
            min: 0
            max: 5
        power:
          hardware:
            type: NI
            channel: PCIe-6738/ao5
            min: 0
            max: 5
        type: Obis
      - wavelength: 561
        onoff:
          hardware:
            type: NI
            channel: PCIe-6738/port1/line3
            min: 0
            max: 5
        power:
          hardware:
            type: NI
            channel: PCIe-6738/ao11
            min: 0
            max: 5
        type: Obis

gui:
  channels:
    count: 5