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docs/source/04_faq/issues/01_channel_switching.rst Normal file
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Slow Channel Switching
----------------------
When we operate multiple channels, there is a clear time delay between channels. This is most obvious when operating in the continuous mode, or when you are acquiring a Z-stack in the Per Z Laser Cycling mode.
This delay is associated with the time it takes to load the waveforms onto the DAQ card. One possible solution is to write the waveforms to different channels on the DAQ, but this would require that the analog/digital signals be combined physically. For example, if CH00 was delivered on AO0, and CH01 was delivered on AO1, but both were communicating with a single laser, then the signals could be combined and delivered to the laser. However, a more obvious solution would be to reduce the time necessary to load the waveforms onto the DAQ card. One immediate way to do this is by reducing the DAQ sampling rate, but this would reduce the resolution of the waveforms. More sophisticated DAQ systems, including an FPGA, could also be used to eliminate this delay.

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Histogram Lag in GUI
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A known issue in the current version is that the histogram display can introduce noticeable lag in the graphical user interface, especially during high-speed imaging or when using a camera with a very large number of pixels. We are actively evaluating alternative strategies to improve performance. In the meantime, users can disable the histogram to improve responsiveness by right-clicking on it and selecting the appropriate entry from the popup menu. The histogram can be re-enabled the same way.

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============
Known Issues
============
This page lists known issues with the **navigate** software that currently do not have an obvious solution. Please report any other issues you encounter on GitHub.
.. _issues-home:
In this section, we outline some common challenges encountered in setting up a microscope system and provide solutions to address these issues effectively.
.. toctree::
:maxdepth: 1
01_channel_switching
02_histogram