Commit Graph

31 Commits

  • feat(cli): add codex doctor diagnostics (#22336)
    ## Why
    
    Users and support need a single command that captures the local Codex
    runtime, configuration, auth, terminal, network, and state shape without
    asking the user to know which diagnostic depth to choose first. `codex
    doctor` now runs the useful checks by default and makes the detailed
    human output the default because the command is usually run when someone
    already needs context.
    
    The command also targets concrete support failure modes we have seen
    while iterating on the design:
    
    - update-target mismatches like #21956, where the installed package
    manager target can differ from the running executable
    - terminal and multiplexer issues that depend on `TERM`, tmux/zellij
    state, color handling, and TTY metadata
    - provider-specific HTTP/WebSocket connectivity, including ChatGPT
    WebSocket handshakes and API-key/provider endpoint reachability
    - local state/log SQLite integrity problems and large rollout
    directories
    - feedback reports that need an attached, redacted diagnostic snapshot
    without asking the user to run a second command
    
    ## What Changed
    
    - Adds `codex doctor` as a grouped CLI diagnostic report with default
    detailed output and `--summary` for the compact view.
    - Adds stable report sections for Environment, Configuration, Updates,
    Connectivity, and Background Server, plus a top Notes block that
    promotes anomalies such as available updates, large rollout directories,
    optional MCP issues, and mixed auth signals.
    - Adds runtime provenance, install consistency, bundled/system search
    readiness, terminal/multiplexer metadata, `config.toml` parse status,
    auth mode details, sandbox details, feature flag summaries, update
    cache/latest-version state, app-server daemon state, SQLite integrity
    checks, rollout statistics, and provider-aware network diagnostics.
    - Adds ChatGPT WebSocket diagnostics that report the negotiated HTTP
    upgrade as `HTTP 101 Switching Protocols` and include timeout, DNS,
    auth, and provider context in detailed output.
    - Makes reachability provider-aware: API-key OpenAI setups check the API
    endpoint, ChatGPT auth checks the ChatGPT path, and custom/AWS/local
    providers check configured HTTP endpoints when available.
    - Adds structured, redacted JSON output where `checks` is keyed by check
    id and `details` is a key/value object for support tooling.
    - Integrates doctor with feedback uploads by attaching a best-effort
    `codex-doctor-report.json` report and adding derived Sentry tags for
    overall status and failing/warning checks.
    - Updates the TUI feedback consent copy so users can see that the doctor
    report is included when logs/diagnostics are uploaded.
    - Updates the CLI bug issue template to ask reporters for `codex doctor
    --json` and render pasted reports as JSON.
    
    ## Example Output
    
    The examples below are sanitized from local smoke runs with `--no-color`
    so the structure is reviewable in plain text.
    
    ### `codex doctor`
    
    ```text
    Codex Doctor v0.0.0 · macos-aarch64
    
    Notes
       ↑ updates      0.130.0 available (current 0.0.0, dismissed 0.128.0)
       ⚠ rollouts     1,526 active files · 2.53 GB on disk
       ⚠ mcp          MCP configuration has optional issues
       ⚠ auth         mixed auth signals: ChatGPT login plus API key env var; HTTP reachability uses API-key mode
    ─────────────────────────────────────────────────────────────
    
    Environment
      ✓ runtime      local debug build
          version                  0.0.0
          install method           other
          commit                   unknown
          executable               ~/code/codex.fcoury-doct…x-rs/target/debug/codex
      ✓ install      consistent
          context                  other
          managed by               npm: no · bun: no · package root —
          PATH entries (2)         ~/.local/share/mise/installs/node/24/bin/codex
                                   ~/.local/share/mise/shims/codex
      ✓ search       ripgrep 15.1.0 (system, `rg`)
      ✓ terminal     Ghostty 1.3.2-main-+b0f827665 · tmux 3.6a · TERM=xterm-256color
          terminal                 Ghostty
          TERM_PROGRAM             ghostty
          terminal version         1.3.2-main-+b0f827665
          TERM                     xterm-256color
          multiplexer              tmux 3.6a
          tmux extended-keys       on
          tmux allow-passthrough   on
          tmux set-clipboard       on
      ✓ state        databases healthy
          CODEX_HOME               ~/.codex (dir)
          state DB                 ~/.codex/state_5.sqlite (file) · integrity ok
          log DB                   ~/.codex/logs_2.sqlite (file) · integrity ok
          active rollouts          1,526 files · 2.53 GB (avg 1.70 MB)
          archived rollouts        8 files · 3.84 MB (avg 491.11 KB)
    
    Configuration
      ✓ config       loaded
          model                    gpt-5.5 · openai
          cwd                      ~/code/codex.fcoury-doctor/codex-rs
          config.toml              ~/.codex/config.toml
          config.toml parse        ok
          MCP servers              1
          feature flags            36 enabled · 7 overridden (full list with --all)
          overrides                code_mode, code_mode_only, memories, chronicle, goals, remote_control, prevent_idle_sleep
      ✓ auth         auth is configured
          auth storage mode        File
          auth file                ~/.codex/auth.json
          auth env vars present    OPENAI_API_KEY
          stored auth mode         chatgpt
          stored API key           false
          stored ChatGPT tokens    true
          stored agent identity    false
      ⚠ mcp          MCP configuration has optional issues — Set the missing MCP env vars or disable the affected server.
          configured servers       1
          disabled servers         0
          streamable_http servers  1
          optional reachability    openaiDeveloperDocs: https://developers.openai.com/mcp (HEAD connect failed; GET connect failed)
      ✓ sandbox      restricted fs + restricted network · approval OnRequest
          approval policy          OnRequest
          filesystem sandbox       restricted
          network sandbox          restricted
    
    Connectivity
      ✓ network      network-related environment looks readable
      ✓ websocket    connected (HTTP 101 Switching Protocols) · 15s timeout
          model provider           openai
          provider name            OpenAI
          wire API                 responses
          supports websockets      true
          connect timeout          15000 ms
          auth mode                chatgpt
          endpoint                 wss://chatgpt.com/backend-api/<redacted>
          DNS                      2 IPv4, 2 IPv6, first IPv6
          handshake result         HTTP 101 Switching Protocols
      ✗ reachability one or more required provider endpoints are unreachable over HTTP — Check proxy, VPN, firewall, DNS, and custom CA configuration.
          reachability mode        API key auth
          openai API               https://api.openai.com/v1 connect failed (required)
    
    Background Server
      ○ app-server   not running (ephemeral mode)
    
    ─────────────────────────────────────────────────────────────
    11 ok · 1 idle · 4 notes · 1 warn · 1 fail failed
    
    --summary compact output           --all expand truncated lists
    --json redacted report
    ```
    
    ### `codex doctor --summary`
    
    ```text
    Codex Doctor v0.0.0 · macos-aarch64
    
    Notes
       ↑ updates      0.130.0 available (current 0.0.0, dismissed 0.128.0)
       ⚠ rollouts     1,526 active files · 2.53 GB on disk
       ⚠ mcp          MCP configuration has optional issues
       ⚠ auth         mixed auth signals: ChatGPT login plus API key env var; HTTP reachability uses API-key mode
    ─────────────────────────────────────────────────────────────
    
    Environment
      ✓ runtime      local debug build
      ✓ install      consistent
      ✓ search       ripgrep 15.1.0 (system, `rg`)
      ✓ terminal     Ghostty 1.3.2-main-+b0f827665 · tmux 3.6a · TERM=xterm-256color
      ✓ state        databases healthy
    
    Configuration
      ✓ config       loaded
      ✓ auth         auth is configured
      ⚠ mcp          MCP configuration has optional issues — Set the missing MCP env vars or disable the affected server.
      ✓ sandbox      restricted fs + restricted network · approval OnRequest
    
    Updates
      ✓ updates      update configuration is locally consistent
    
    Connectivity
      ✓ network      network-related environment looks readable
      ✓ websocket    connected (HTTP 101 Switching Protocols) · 15s timeout
      ✗ reachability one or more required provider endpoints are unreachable over HTTP — Check proxy, VPN, firewall, DNS, and custom CA configuration.
    
    Background Server
      ○ app-server   not running (ephemeral mode)
    
    ─────────────────────────────────────────────────────────────
    11 ok · 1 idle · 4 notes · 1 warn · 1 fail failed
    
    Run codex doctor without --summary for detailed diagnostics.
    --all expand truncated lists       --json redacted report
    ```
    
    ### `codex doctor --json` shape
    
    ```json
    {
      "schema_version": 1,
      "overall_status": "fail",
      "checks": {
        "runtime.provenance": {
          "id": "runtime.provenance",
          "category": "Environment",
          "status": "ok",
          "summary": "local debug build",
          "details": {
            "version": "0.0.0",
            "install method": "other",
            "commit": "unknown"
          }
        },
        "sandbox.helpers": {
          "id": "sandbox.helpers",
          "category": "Configuration",
          "status": "ok",
          "summary": "restricted fs + restricted network · approval OnRequest",
          "details": {
            "approval policy": "OnRequest",
            "filesystem sandbox": "restricted",
            "network sandbox": "restricted"
          }
        }
      }
    }
    ```
    
    ### `/feedback` new sentry attachment
    
    <img width="938" height="798" alt="CleanShot 2026-05-13 at 15 36 14"
    src="https://github.com/user-attachments/assets/715e62e0-d7b4-4fea-a35a-fd5d5d33c4c0"
    />
    
    ### New section in CLI issue template
    
    <img width="1164" height="435" alt="CleanShot 2026-05-13 at 15 47 24"
    src="https://github.com/user-attachments/assets/9081dc25-a28c-4afa-8ba1-e299c2b4031d"
    />
    
    ## How to Test
    
    1. Run `cargo run --bin codex -- doctor --no-color`.
    2. Confirm the detailed report is the default and includes promoted
    Notes, grouped sections, terminal details, state DB integrity, rollout
    stats, provider reachability, WebSocket diagnostics, and app-server
    status.
    3. Run `cargo run --bin codex -- doctor --summary --no-color`.
    4. Confirm the compact view keeps the same sections and summary counts
    but omits detailed key/value rows.
    5. Run `cargo run --bin codex -- doctor --json`.
    6. Confirm the output is redacted JSON, `checks` is an object keyed by
    check id, and each check's `details` is a key/value object.
    7. Preview the CLI bug issue template and confirm the `Codex doctor
    report` field appears after the terminal field, asks for `codex doctor
    --json`, and renders pasted output as JSON.
    8. Start a feedback flow that includes logs.
    9. Confirm the upload consent copy lists `codex-doctor-report.json`
    alongside the log attachments.
    
    Targeted tests:
    
    - `cargo test -p codex-cli doctor`
    - `cargo test -p codex-app-server
    doctor_report_tags_summarize_status_counts`
    - `cargo test -p codex-feedback`
    - `cargo test -p codex-tui feedback_view`
    - `just argument-comment-lint`
    - `git diff --check`
  • Add process-scoped SQLite telemetry (#22154)
    ## Summary
    - add SQLite init, backfill-gate, and fallback telemetry without
    introducing a cross-cutting state-db access wrapper
    - install one process-scoped telemetry sink after OTEL startup and let
    low-level state/rollout paths emit through it directly
    - add process-start metrics for the process owners that initialize
    SQLite
    
    ---------
    
    Co-authored-by: Owen Lin <owen@openai.com>
  • sqlite: no more destructive version bumps (#21847)
    ## Why
    
    We'd like SQLite state to become required and load-bearing. As a first
    step, let's remove the mechanism that allows us to blow away the SQLite
    DB on a version bump, and instead rely on graceful migrations.
    
    The original motivation
    ([PR](https://github.com/openai/codex/pull/10623)) behind this mechanism
    was to care less about backwards compatibility while SQLite was being
    landed, but I'd say it's quite important now to keep the data in it.
    
    ## What changed
    
    - Make `STATE_DB_FILENAME` and `LOGS_DB_FILENAME` the full canonical
    filenames: `state_5.sqlite` and `logs_2.sqlite`.
    - Remove `STATE_DB_VERSION` / `LOGS_DB_VERSION` and the helper that
    constructed filenames from versions.
    - Stop `StateRuntime::init` from scanning for or deleting older SQLite
    DB filenames at startup.
    - Delete the tests that encoded legacy state/logs DB deletion behavior.
    
    ## Verification
    
    - `cargo test -p codex-state`
  • feat: use git-backed workspace diffs for memory consolidation (#18982)
    ## Why
    
    This PR make the `morpheus` agent (memory phase 2) use a git diff to
    start it's consolidation. The workflow is the following:
    1. The agent acquire a lock
    2. If `.codex/memories` does not exist or is not a git root, initialize
    everything (and make a first empty commit)
    3. Update `raw_memories.md` and `rollout_summaries/` as before.
    Basically we select max N phase 1 memories based on a given policy
    4. We use git (`gix`) to get a diff between the current state of
    `.codex/memories` and the last commit.
    5. Dump the diff in `phase2_workspace_diff.md`
    6. Spawn `morpheus` and point it to `phase2_workspace_diff.md`
    7. Wait for `morpheus` to be done
    8. Re-create a new `.git` and make one single commit on it. We do this
    because we don't want to preserve history through `.git` and this is
    cheap anyway
    9. We release the lock
    On top of this, we keep the retry policies etc etc
    
    The goals of this new workflow are:
    * Better support of any memory extensions such as `chronicle`
    * Allow the user to manually edit memories and this will be considered
    by the phase 2 agent
     
    As a follow-up we will need to add support for user's edition while
    `morpheus` is running
    
    ## What Changed
    
    - Added memory workspace helpers that prepare the git baseline, compute
    the diff, write `phase2_workspace_diff.md`, and reset the baseline after
    successful consolidation.
    - Updated Phase 2 to sync current inputs into `raw_memories.md` and
    `rollout_summaries/`, prune old extension resources, skip clean
    workspaces, and run the consolidation subagent only when the workspace
    has changes.
    - Tightened Phase 2 job ownership around long-running consolidation with
    heartbeats and an ownership check before resetting the baseline.
    - Simplified the prompt and state APIs so DB watermarks are bookkeeping,
    while workspace dirtiness decides whether consolidation work exists.
    - Updated the memory pipeline README and tests for workspace diffs,
    extension-resource cleanup, pollution-driven forgetting, selection
    ranking, and baseline persistence.
    
    ## Verification
    
    - Added/updated coverage in `core/src/memories/tests.rs`,
    `core/src/memories/workspace_tests.rs`, `state/src/runtime/memories.rs`,
    and `core/tests/suite/memories.rs`.
    
    ---------
    
    Co-authored-by: Codex <noreply@openai.com>
  • Add goal persistence foundation (1 / 5) (#18073)
    Adds the persisted goal foundation for the rest of the stack. This PR is
    intentionally limited to feature flag and state-layer behavior;
    app-server APIs, model tools, runtime continuation, and TUI UX are
    layered in later PRs.
    
    ## Why
    
    Goal mode needs durable thread-level state before clients or model tools
    can safely build on it. The state layer needs to know whether a goal
    exists, what objective it tracks, whether it is active, paused,
    budget-limited, or complete, and how much time/token usage has already
    been accounted.
    
    ## What changed
    
    - Added the `goals` feature flag and generated config schema entry.
    - Added the `thread_goals` state table and Rust model for persisted
    thread goals.
    - Added state runtime APIs for creating, replacing, updating, deleting,
    and accounting goal usage.
    - Added `goal_id`-based stale update protection so an old goal update
    cannot overwrite a replacement.
    - Kept this PR scoped to persistence and state runtime behavior, with no
    app-server, model-facing, continuation, or TUI behavior yet.
    
    ## Verification
    
    - Added state runtime coverage for goal creation, replacement, stale
    update protection, status transitions, token-budget behavior, and usage
    accounting.
  • app-server: persist device key bindings in sqlite (#19206)
    ## Why
    
    Device-key providers should only own platform key material. The
    account/client binding used to authorize a signing payload is app-server
    state, and keeping that state in provider-specific metadata makes the
    same check harder to audit and harder to share across platform
    implementations.
    
    Persisting the binding in the shared state database gives the device-key
    crate a platform-neutral source of truth before it asks a provider to
    sign. It also lets app-server move potentially blocking key operations
    off the main message processor path, which matters once providers may
    wait for OS authentication prompts.
    
    ## What changed
    
    - Add a `device_key_bindings` state migration plus `StateRuntime`
    helpers keyed by `key_id`.
    - Add an async `DeviceKeyBindingStore` abstraction to `codex-device-key`
    and use it from `DeviceKeyStore::create` and `DeviceKeyStore::sign`.
    - Keep provider calls behind async store methods and run the synchronous
    provider work through `spawn_blocking`.
    - Wire app-server device-key RPC handling to the SQLite-backed binding
    store and spawn response/error delivery tasks for device-key requests.
    - Run the turn-start tracing test on the existing larger current-thread
    test harness after the larger async surface made the default test stack
    too small locally.
    
    ## Validation
    
    - `cargo test -p codex-device-key`
    - `cargo test -p codex-state device_key`
    - `cargo test -p codex-state`
    - `cargo test -p codex-app-server device_key`
    - `cargo test -p codex-app-server
    message_processor::tracing_tests::turn_start_jsonrpc_span_parents_core_turn_spans`
    - `cargo test -p codex-app-server`
    - `just fix -p codex-device-key`
    - `just fix -p codex-state`
    - `just fix -p codex-app-server`
    - `just bazel-lock-update`
    - `just bazel-lock-check`
    - `git diff --check`
  • Add sorting/backwardsCursor to thread/list and new thread/turns/list api (#17305)
    To improve performance of UI loads from the app, add two main
    improvements:
    1. The `thread/list` api now gets a `sortDirection` request field and a
    `backwardsCursor` to the response, which lets you paginate forwards and
    backwards from a window. This lets you fetch the first few items to
    display immediately while you paginate to fill in history, then can
    paginate "backwards" on future loads to catch up with any changes since
    the last UI load without a full reload of the entire data set.
    2. Added a new `thread/turns/list` api which also has sortDirection and
    backwardsCursor for the same behavior as `thread/list`, allowing you the
    same small-fetch for immediate display followed by background fill-in
    and resync catchup.
  • feat: log db better maintenance (#16330)
    Run a DB clean-up more frequently with an incremental `VACCUM` in it
  • feat: add graph representation of agent network (#15056)
    Add a representation of the agent graph. This is now used for:
    * Cascade close agents (when I close a parent, it close the kids)
    * Cascade resume (oposite)
    
    Later, this will also be used for post-compaction stuffing of the
    context
    
    Direct fix for: https://github.com/openai/codex/issues/14458
  • chore: improve DB flushing (#13620)
    This branch:
    * Avoid flushing DB when not necessary
    * Filter events for which we perfom an `upsert` into the DB
    * Add a dedicated update function of the `thread:updated_at` that is
    lighter
    
    This should significantly reduce the DB lock contention. If it is not
    sufficient, we can de-sync the flush of the DB for `updated_at`
  • Move sqlite logs to a dedicated database (#13772)
    ## Summary
    - move sqlite log reads and writes onto a dedicated `logs_1.sqlite`
    database to reduce lock contention with the main state DB
    - add a dedicated logs migrator and route `codex-state-logs` to the new
    database path
    - leave the old `logs` table in the existing state DB untouched for now
    
    ## Testing
    - just fmt
    - cargo test -p codex-state
    
    ---------
    
    Co-authored-by: Codex <noreply@openai.com>
  • feat: memories forgetting (#12900)
    Add diff based memory forgetting
  • Agent jobs (spawn_agents_on_csv) + progress UI (#10935)
    ## Summary
    - Add agent job support: spawn a batch of sub-agents from CSV, auto-run,
    auto-export, and store results in SQLite.
    - Simplify workflow: remove run/resume/get-status/export tools; spawn is
    deterministic and completes in one call.
    - Improve exec UX: stable, single-line progress bar with ETA; suppress
    sub-agent chatter in exec.
    
    ## Why
    Enables map-reduce style workflows over arbitrarily large repos using
    the existing Codex orchestrator. This addresses review feedback about
    overly complex job controls and non-deterministic monitoring.
    
    ## Demo (progress bar)
    ```
    ./codex-rs/target/debug/codex exec \
      --enable collab \
      --enable sqlite \
      --full-auto \
      --progress-cursor \
      -c agents.max_threads=16 \
      -C /Users/daveaitel/code/codex \
      - <<'PROMPT'
    Create /tmp/agent_job_progress_demo.csv with columns: path,area and 30 rows:
    path = item-01..item-30, area = test.
    
    Then call spawn_agents_on_csv with:
    - csv_path: /tmp/agent_job_progress_demo.csv
    - instruction: "Run `python - <<'PY'` to sleep a random 0.3–1.2s, then output JSON with keys: path, score (int). Set score = 1."
    - output_csv_path: /tmp/agent_job_progress_demo_out.csv
    PROMPT
    ```
    
    ## Review feedback addressed
    - Auto-start jobs on spawn; removed run/resume/status/export tools.
    - Auto-export on success.
    - More descriptive tool spec + clearer prompts.
    - Avoid deadlocks on spawn failure; pending/running handled safely.
    - Progress bar no longer scrolls; stable single-line redraw.
    
    ## Tests
    - `cd codex-rs && cargo test -p codex-exec`
    - `cd codex-rs && cargo build -p codex-cli`
  • feat: mem v2 - PR4 (#11369)
    # Memories migration plan (simplified global workflow)
    
    ## Target behavior
    
    - One shared memory root only: `~/.codex/memories/`.
    - No per-cwd memory buckets, no cwd hash handling.
    - Phase 1 candidate rules:
    - Not currently being processed unless the job lease is stale.
    - Rollout updated within the max-age window (currently 30 days).
    - Rollout idle for at least 12 hours (new constant).
    - Global cap: at most 64 stage-1 jobs in `running` state at any time
    (new invariant).
    - Stage-1 model output shape (new):
    - `rollout_slug` (accepted but ignored for now).
    - `rollout_summary`.
    - `raw_memory`.
    - Phase-1 artifacts written under the shared root:
    - `rollout_summaries/<thread_id>.md` for each rollout summary.
    - `raw_memories.md` containing appended/merged raw memory paragraphs.
    - Phase 2 runs one consolidation agent for the shared `memories/`
    directory.
    - Phase-2 lock is DB-backed with 1 hour lease and heartbeat/expiry.
    
    ## Current code map
    
    - Core startup pipeline: `core/src/memories/startup/mod.rs`.
    - Stage-1 request+parse: `core/src/memories/startup/extract.rs`,
    `core/src/memories/stage_one.rs`, templates in
    `core/templates/memories/`.
    - File materialization: `core/src/memories/storage.rs`,
    `core/src/memories/layout.rs`.
    - Scope routing (cwd/user): `core/src/memories/scope.rs`,
    `core/src/memories/startup/mod.rs`.
    - DB job lifecycle and scope queueing: `state/src/runtime/memory.rs`.
    
    ## PR plan
    
    ## PR 1: Correct phase-1 selection invariants (no behavior-breaking
    layout changes yet)
    
    - Add `PHASE_ONE_MIN_ROLLOUT_IDLE_HOURS: i64 = 12` in
    `core/src/memories/mod.rs`.
    - Thread this into `state::claim_stage1_jobs_for_startup(...)`.
    - Enforce idle-time filter in DB selection logic (not only in-memory
    filtering after `scan_limit`) so eligible threads are not starved by
    very recent threads.
    - Enforce global running cap of 64 at claim time in DB logic:
    - Count fresh `memory_stage1` running jobs.
    - Only allow new claims while count < cap.
    - Keep stale-lease takeover behavior intact.
    - Add/adjust tests in `state/src/runtime.rs`:
    - Idle filter inclusion/exclusion around 12h boundary.
    - Global running-cap guarantee.
    - Existing stale/fresh ownership behavior still passes.
    
    Acceptance criteria:
    - Startup never creates more than 64 fresh `memory_stage1` running jobs.
    - Threads updated <12h ago are skipped.
    - Threads older than 30d are skipped.
    
    ## PR 2: Stage-1 output contract + storage artifacts
    (forward-compatible)
    
    - Update parser/types to accept the new structured output while keeping
    backward compatibility:
    - Add `rollout_slug` (optional for now).
    - Add `rollout_summary`.
    - Keep alias support for legacy `summary` and `rawMemory` until prompt
    swap completes.
    - Update stage-1 schema generator in `core/src/memories/stage_one.rs` to
    include the new keys.
    - Update prompt templates:
    - `core/templates/memories/stage_one_system.md`.
    - `core/templates/memories/stage_one_input.md`.
    - Replace storage model in `core/src/memories/storage.rs`:
    - Introduce `rollout_summaries/` directory writer (`<thread_id>.md`
    files).
    - Introduce `raw_memories.md` aggregator writer from DB rows.
    - Keep deterministic rebuild behavior from DB outputs so files can
    always be regenerated.
    - Update consolidation prompt template to reference `rollout_summaries/`
    + `raw_memories.md` inputs.
    
    Acceptance criteria:
    - Stage-1 accepts both old and new output keys during migration.
    - Phase-1 artifacts are generated in new format from DB state.
    - No dependence on per-thread files in `raw_memories/`.
    
    ## PR 3: Remove per-cwd memories and move to one global memory root
    
    - Simplify layout in `core/src/memories/layout.rs`:
    - Single root: `codex_home/memories`.
    - Remove cwd-hash bucket helpers and normalization logic used only for
    memory pathing.
    - Remove scope branching from startup phase-2 dispatch path:
    - No cwd/user mapping in `core/src/memories/startup/mod.rs`.
    - One target root for consolidation.
    - In `state/src/runtime/memory.rs`, stop enqueueing/handling cwd
    consolidation scope.
    - Keep one logical consolidation scope/job key (global/user) to avoid a
    risky schema rewrite in same PR.
    - Add one-time migration helper (core side) to preserve current shared
    memory output:
    - If `~/.codex/memories/user/memory` exists and new root is empty,
    move/copy contents into `~/.codex/memories`.
    - Leave old hashed cwd buckets untouched for now (safe/no-destructive
    migration).
    
    Acceptance criteria:
    - New runs only read/write `~/.codex/memories`.
    - No new cwd-scoped consolidation jobs are enqueued.
    - Existing user-shared memory content is preserved.
    
    ## PR 4: Phase-2 global lock simplification and cleanup
    
    - Replace multi-scope dispatch with a single global consolidation claim
    path:
    - Either reuse jobs table with one fixed key, or add a tiny dedicated
    lock helper; keep 1h lease.
    - Ensure at most one consolidation agent can run at once.
    - Keep heartbeat + stale lock recovery semantics in
    `core/src/memories/startup/watch.rs`.
    - Remove dead scope code and legacy constants no longer used.
    - Update tests:
    - One-agent-at-a-time behavior.
    - Lock expiry allows takeover after stale lease.
    
    Acceptance criteria:
    - Exactly one phase-2 consolidation agent can be active cluster-wide
    (per local DB).
    - Stale lock recovers automatically.
    
    ## PR 5: Final cleanup and docs
    
    - Remove legacy artifacts and references:
    - `raw_memories/` and `memory_summary.md` assumptions from
    prompts/comments/tests.
    - Scope constants for cwd memory pathing in core/state if fully unused.
    - Update docs under `docs/` for memory workflow and directory layout.
    - Add a brief operator note for rollout: compatibility window for old
    stage-1 JSON keys and when to remove aliases.
    
    Acceptance criteria:
    - Code and docs reflect only the simplified global workflow.
    - No stale references to per-cwd memory buckets.
    
    ## Notes on sequencing
    
    - PR 1 is safest first because it improves correctness without changing
    external artifact layout.
    - PR 2 keeps parser compatibility so prompt deployment can happen
    independently.
    - PR 3 and PR 4 split filesystem/scope simplification from locking
    simplification to reduce blast radius.
    - PR 5 is intentionally cleanup-only.
  • feat: mem v2 - PR1 (#11364)
    # Memories migration plan (simplified global workflow)
    
    ## Target behavior
    
    - One shared memory root only: `~/.codex/memories/`.
    - No per-cwd memory buckets, no cwd hash handling.
    - Phase 1 candidate rules:
    - Not currently being processed unless the job lease is stale.
    - Rollout updated within the max-age window (currently 30 days).
    - Rollout idle for at least 12 hours (new constant).
    - Global cap: at most 64 stage-1 jobs in `running` state at any time
    (new invariant).
    - Stage-1 model output shape (new):
    - `rollout_slug` (accepted but ignored for now).
    - `rollout_summary`.
    - `raw_memory`.
    - Phase-1 artifacts written under the shared root:
    - `rollout_summaries/<thread_id>.md` for each rollout summary.
    - `raw_memories.md` containing appended/merged raw memory paragraphs.
    - Phase 2 runs one consolidation agent for the shared `memories/`
    directory.
    - Phase-2 lock is DB-backed with 1 hour lease and heartbeat/expiry.
    
    ## Current code map
    
    - Core startup pipeline: `core/src/memories/startup/mod.rs`.
    - Stage-1 request+parse: `core/src/memories/startup/extract.rs`,
    `core/src/memories/stage_one.rs`, templates in
    `core/templates/memories/`.
    - File materialization: `core/src/memories/storage.rs`,
    `core/src/memories/layout.rs`.
    - Scope routing (cwd/user): `core/src/memories/scope.rs`,
    `core/src/memories/startup/mod.rs`.
    - DB job lifecycle and scope queueing: `state/src/runtime/memory.rs`.
    
    ## PR plan
    
    ## PR 1: Correct phase-1 selection invariants (no behavior-breaking
    layout changes yet)
    
    - Add `PHASE_ONE_MIN_ROLLOUT_IDLE_HOURS: i64 = 12` in
    `core/src/memories/mod.rs`.
    - Thread this into `state::claim_stage1_jobs_for_startup(...)`.
    - Enforce idle-time filter in DB selection logic (not only in-memory
    filtering after `scan_limit`) so eligible threads are not starved by
    very recent threads.
    - Enforce global running cap of 64 at claim time in DB logic:
    - Count fresh `memory_stage1` running jobs.
    - Only allow new claims while count < cap.
    - Keep stale-lease takeover behavior intact.
    - Add/adjust tests in `state/src/runtime.rs`:
    - Idle filter inclusion/exclusion around 12h boundary.
    - Global running-cap guarantee.
    - Existing stale/fresh ownership behavior still passes.
    
    Acceptance criteria:
    - Startup never creates more than 64 fresh `memory_stage1` running jobs.
    - Threads updated <12h ago are skipped.
    - Threads older than 30d are skipped.
    
    ## PR 2: Stage-1 output contract + storage artifacts
    (forward-compatible)
    
    - Update parser/types to accept the new structured output while keeping
    backward compatibility:
    - Add `rollout_slug` (optional for now).
    - Add `rollout_summary`.
    - Keep alias support for legacy `summary` and `rawMemory` until prompt
    swap completes.
    - Update stage-1 schema generator in `core/src/memories/stage_one.rs` to
    include the new keys.
    - Update prompt templates:
    - `core/templates/memories/stage_one_system.md`.
    - `core/templates/memories/stage_one_input.md`.
    - Replace storage model in `core/src/memories/storage.rs`:
    - Introduce `rollout_summaries/` directory writer (`<thread_id>.md`
    files).
    - Introduce `raw_memories.md` aggregator writer from DB rows.
    - Keep deterministic rebuild behavior from DB outputs so files can
    always be regenerated.
    - Update consolidation prompt template to reference `rollout_summaries/`
    + `raw_memories.md` inputs.
    
    Acceptance criteria:
    - Stage-1 accepts both old and new output keys during migration.
    - Phase-1 artifacts are generated in new format from DB state.
    - No dependence on per-thread files in `raw_memories/`.
    
    ## PR 3: Remove per-cwd memories and move to one global memory root
    
    - Simplify layout in `core/src/memories/layout.rs`:
    - Single root: `codex_home/memories`.
    - Remove cwd-hash bucket helpers and normalization logic used only for
    memory pathing.
    - Remove scope branching from startup phase-2 dispatch path:
    - No cwd/user mapping in `core/src/memories/startup/mod.rs`.
    - One target root for consolidation.
    - In `state/src/runtime/memory.rs`, stop enqueueing/handling cwd
    consolidation scope.
    - Keep one logical consolidation scope/job key (global/user) to avoid a
    risky schema rewrite in same PR.
    - Add one-time migration helper (core side) to preserve current shared
    memory output:
    - If `~/.codex/memories/user/memory` exists and new root is empty,
    move/copy contents into `~/.codex/memories`.
    - Leave old hashed cwd buckets untouched for now (safe/no-destructive
    migration).
    
    Acceptance criteria:
    - New runs only read/write `~/.codex/memories`.
    - No new cwd-scoped consolidation jobs are enqueued.
    - Existing user-shared memory content is preserved.
    
    ## PR 4: Phase-2 global lock simplification and cleanup
    
    - Replace multi-scope dispatch with a single global consolidation claim
    path:
    - Either reuse jobs table with one fixed key, or add a tiny dedicated
    lock helper; keep 1h lease.
    - Ensure at most one consolidation agent can run at once.
    - Keep heartbeat + stale lock recovery semantics in
    `core/src/memories/startup/watch.rs`.
    - Remove dead scope code and legacy constants no longer used.
    - Update tests:
    - One-agent-at-a-time behavior.
    - Lock expiry allows takeover after stale lease.
    
    Acceptance criteria:
    - Exactly one phase-2 consolidation agent can be active cluster-wide
    (per local DB).
    - Stale lock recovers automatically.
    
    ## PR 5: Final cleanup and docs
    
    - Remove legacy artifacts and references:
    - `raw_memories/` and `memory_summary.md` assumptions from
    prompts/comments/tests.
    - Scope constants for cwd memory pathing in core/state if fully unused.
    - Update docs under `docs/` for memory workflow and directory layout.
    - Add a brief operator note for rollout: compatibility window for old
    stage-1 JSON keys and when to remove aliases.
    
    Acceptance criteria:
    - Code and docs reflect only the simplified global workflow.
    - No stale references to per-cwd memory buckets.
    
    ## Notes on sequencing
    
    - PR 1 is safest first because it improves correctness without changing
    external artifact layout.
    - PR 2 keeps parser compatibility so prompt deployment can happen
    independently.
    - PR 3 and PR 4 split filesystem/scope simplification from locking
    simplification to reduce blast radius.
    - PR 5 is intentionally cleanup-only.
  • feat: phase 2 consolidation (#11306)
    Consolidation phase of memories
    
    Cleaning and better handling of concurrency
  • feat: align memory phase 1 and make it stronger (#11300)
    ## Align with the new phase-1 design
    
    Basically we know run phase 1 in parallel by considering:
    * Max 64 rollouts
    * Max 1 month old
    * Consider the most recent first
    
    This PR also adds stronger parallelization capabilities by detecting
    stale jobs, retry policies, ownership of computation to prevent double
    computations etc etc
  • feat: resumable backfill (#10745)
    ## Summary
    
    This PR makes SQLite rollout backfill resumable and repeatable instead
    of one-shot-on-db-create.
    
    ## What changed
    
    - Added a persisted backfill state table:
      - state/migrations/0008_backfill_state.sql
    - Tracks status (pending|running|complete), last_watermark, and
    last_success_at.
    - Added backfill state model/types in codex-state:
      - BackfillState, BackfillStatus (state/src/model/backfill_state.rs)
    - Added runtime APIs to manage backfill lifecycle/progress:
      - get_backfill_state
      - mark_backfill_running
      - checkpoint_backfill
      - mark_backfill_complete
    - Updated core startup behavior:
    - Backfill now runs whenever state is not Complete (not only when DB
    file is newly created).
    - Reworked backfill execution:
    - Collect rollout files, derive deterministic watermark per path, sort,
    resume from last_watermark.
    - Process in batches (BACKFILL_BATCH_SIZE = 200), checkpoint after each
    batch.
      - Mark complete with last_success_at at the end.
    
    ## Why
    
    Previous behavior could leave users permanently partially backfilled if
    the process exited during initial async backfill. This change allows
    safe continuation across restarts and avoids restarting from scratch.
  • feat: add phase 1 mem db (#10634)
    - Schema: thread_id (PK, FK to threads.id with cascade delete),
    trace_summary, memory_summary, updated_at.
    - Migration: creates the table and an index on (updated_at DESC,
    thread_id DESC) for efficient recent-first reads.
      - Runtime API (DB-only):
          - `get_thread_memory(thread_id)`: fetch one memory row.
    - `upsert_thread_memory(thread_id, trace_summary, memory_summary)`:
    insert/update by thread id and always advance updated_at.
    - `get_last_n_thread_memories_for_cwd(cwd, n)`: join thread_memory with
    threads and return newest n rows for an exact cwd match.
    - Model layer: introduced ThreadMemory and row conversion types to keep
    query decoding typed and consistent with existing state models.
  • Migrate state DB path helpers to versioned filename (#10623)
    Summary
    - add versioned state sqlite filename helpers and re-export them from
    the state crate
    - remove legacy state files when initializing the runtime and update
    consumers/tests to use the new helpers
    - tweak logs client description and database resolution to match the new
    path
  • feat: backfill timing metric (#10218)
    1. Add a metric to measure the backfill time
    2. Add a unit to the timing histogram
  • chore: unify log queries (#10152)
    Unify log queries to only have SQLX code in the runtime and use it for
    both the log client and for tests
  • feat: add log db (#10086)
    Add a log DB. The goal is just to store our logs in a `.sqlite` DB to
    make it easier to crawl them and drop the oldest ones.
  • feat: sqlite 1 (#10004)
    Add a `.sqlite` database to be used to store rollout metatdata (and
    later logs)
    This PR is phase 1:
    * Add the database and the required infrastructure
    * Add a backfill of the database
    * Persist the newly created rollout both in files and in the DB
    * When we need to get metadata or a rollout, consider the `JSONL` as the
    source of truth but compare the results with the DB and show any errors