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32 Commits

  • Apply argument comment lint across codex-rs (#14652)
    ## Why
    
    Once the repo-local lint exists, `codex-rs` needs to follow the
    checked-in convention and CI needs to keep it from drifting. This commit
    applies the fallback `/*param*/` style consistently across existing
    positional literal call sites without changing those APIs.
    
    The longer-term preference is still to avoid APIs that require comments
    by choosing clearer parameter types and call shapes. This PR is
    intentionally the mechanical follow-through for the places where the
    existing signatures stay in place.
    
    After rebasing onto newer `main`, the rollout also had to cover newly
    introduced `tui_app_server` call sites. That made it clear the first cut
    of the CI job was too expensive for the common path: it was spending
    almost as much time installing `cargo-dylint` and re-testing the lint
    crate as a representative test job spends running product tests. The CI
    update keeps the full workspace enforcement but trims that extra
    overhead from ordinary `codex-rs` PRs.
    
    ## What changed
    
    - keep a dedicated `argument_comment_lint` job in `rust-ci`
    - mechanically annotate remaining opaque positional literals across
    `codex-rs` with exact `/*param*/` comments, including the rebased
    `tui_app_server` call sites that now fall under the lint
    - keep the checked-in style aligned with the lint policy by using
    `/*param*/` and leaving string and char literals uncommented
    - cache `cargo-dylint`, `dylint-link`, and the relevant Cargo
    registry/git metadata in the lint job
    - split changed-path detection so the lint crate's own `cargo test` step
    runs only when `tools/argument-comment-lint/*` or `rust-ci.yml` changes
    - continue to run the repo wrapper over the `codex-rs` workspace, so
    product-code enforcement is unchanged
    
    Most of the code changes in this commit are intentionally mechanical
    comment rewrites or insertions driven by the lint itself.
    
    ## Verification
    
    - `./tools/argument-comment-lint/run.sh --workspace`
    - `cargo test -p codex-tui-app-server -p codex-tui`
    - parsed `.github/workflows/rust-ci.yml` locally with PyYAML
    
    ---
    
    * -> #14652
    * #14651
  • feat(app-server, core): add more spans (#14479)
    ## Description
    
    This PR expands tracing coverage across app-server thread startup, core
    session initialization, and the Responses transport layer. It also gives
    core dispatch spans stable operation-specific names so traces are easier
    to follow than the old generic `submission_dispatch` spans.
    
    Also use `fmt::Display` for types that we serialize in traces so we send
    strings instead of rust types
  • feat(app-server): propagate traces across tasks and core ops (#14387)
    ## Summary
    
    This PR keeps app-server RPC request trace context alive for the full
    lifetime of the work that request kicks off (e.g. for `thread/start`,
    this is `app-server rpc handler -> tokio background task -> core op
    submissions`). Previously we lose trace lineage once the request handler
    returns or hands work off to background tasks.
    
    This approach is especially relevant for `thread/start` and other RPC
    handlers that run in a non-blocking way. In the near future we'll most
    likely want to make all app-server handlers run in a non-blocking way by
    default, and only queue operations that must operate in order (e.g.
    thread RPCs per thread?), so we want to make sure tracing in app-server
    just generally works.
    
    Depends on https://github.com/openai/codex/pull/14300
    
    **Before**
    <img width="155" height="207" alt="image"
    src="https://github.com/user-attachments/assets/c9487459-36f1-436c-beb7-fafeb40737af"
    />
    
    
    **After**
    <img width="299" height="337" alt="image"
    src="https://github.com/user-attachments/assets/727392b2-d072-4427-9dc4-0502d8652dea"
    />
    
    ## What changed
    
    - Keep request-scoped trace context around until we send the final
    response or error, or the connection closes.
    - Thread that trace context through detached `thread/start` work so
    background startup stays attached to the originating request.
    - Pass request trace context through to downstream core operations,
    including:
      - thread creation
      - resume/fork flows
      - turn submission
      - review
      - interrupt
      - realtime conversation operations
    - Add tracing tests that verify:
      - remote W3C trace context is preserved for `thread/start`
      - remote W3C trace context is preserved for `turn/start`
      - downstream core spans stay under the originating request span
      - request-scoped tracing state is cleaned up correctly
    - Clean up shutdown behavior so detached background tasks and spawned
    threads are drained before process exit.
  • Add in-process app server and wire up exec to use it (#14005)
    This is a subset of PR #13636. See that PR for a full overview of the
    architectural change.
    
    This PR implements the in-process app server and modifies the
    non-interactive "exec" entry point to use the app server.
    
    ---------
    
    Co-authored-by: Felipe Coury <felipe.coury@gmail.com>
  • chore(app-server): delete v1 RPC methods and notifications (#13375)
    ## Summary
    This removes the old app-server v1 methods and notifications we no
    longer need, while keeping the small set the main codex app client still
    depends on for now.
    
    The remaining legacy surface is:
    - `initialize`
    - `getConversationSummary`
    - `getAuthStatus`
    - `gitDiffToRemote`
    - `fuzzyFileSearch`
    - `fuzzyFileSearch/sessionStart`
    - `fuzzyFileSearch/sessionUpdate`
    - `fuzzyFileSearch/sessionStop`
    
    And the raw `codex/event/*` notifications emitted from core. These
    notifications will be removed in a followup PR.
    
    ## What changed
    - removed deprecated v1 request variants from the protocol and
    app-server dispatcher
    - removed deprecated typed notifications: `authStatusChange`,
    `loginChatGptComplete`, and `sessionConfigured`
    - updated the app-server test client to use v2 flows instead of deleted
    v1 flows
    - deleted legacy-only app-server test suites and added focused coverage
    for `getConversationSummary`
    - regenerated app-server schema fixtures and updated the MCP interface
    docs to match the remaining compatibility surface
    
    ## Testing
    - `just write-app-server-schema`
    - `cargo test -p codex-app-server-protocol`
    - `cargo test -p codex-app-server`
  • [codex] include plan type in account updates (#13181)
    This change fixes a Codex app account-state sync bug where clients could
    know the user was signed in but still miss the ChatGPT subscription
    tier, which could lead to incorrect upgrade messaging for paid users.
    
    The root cause was that `account/updated` only carried `authMode` while
    plan information was available separately via `account/read` and
    rate-limit snapshots, so this update adds `planType` to
    `account/updated`, populates it consistently across login and refresh
    paths.
  • app-server: Replay pending item requests on thread/resume (#12560)
    Replay pending client requests after `thread/resume` and emit resolved
    notifications when those requests clear so approval/input UI state stays
    in sync after reconnects and across subscribed clients.
    
    Affected RPCs:
    - `item/commandExecution/requestApproval`
    - `item/fileChange/requestApproval`
    - `item/tool/requestUserInput`
    
    Motivation:
    - Resumed clients need to see pending approval/input requests that were
    already outstanding before the reconnect.
    - Clients also need an explicit signal when a pending request resolves
    or is cleared so stale UI can be removed on turn start, completion, or
    interruption.
    
    Implementation notes:
    - Use pending client requests from `OutgoingMessageSender` in order to
    replay them after `thread/resume` attaches the connection, using
    original request ids.
    - Emit `serverRequest/resolved` when pending requests are answered
    or cleared by lifecycle cleanup.
    - Update the app-server protocol schema, generated TypeScript bindings,
    and README docs for the replay/resolution flow.
    
    High-level test plan:
    - Added automated coverage for replaying pending command execution and
    file change approval requests on `thread/resume`.
    - Added automated coverage for resolved notifications in command
    approval, file change approval, request_user_input, turn start, and turn
    interrupt flows.
    - Verified schema/docs updates in the relevant protocol and app-server
    tests.
    
    Manual testing:
    - Tested reconnect/resume with multiple connections.
    - Confirmed state stayed in sync between connections.
  • feat(app-server): thread/unsubscribe API (#10954)
    Adds a new v2 app-server API for a client to be able to unsubscribe to a
    thread:
    - New RPC method: `thread/unsubscribe`
    - New server notification: `thread/closed`
    
    Today clients can start/resume/archive threads, but there wasn’t a way
    to explicitly unload a live thread from memory without archiving it.
    With `thread/unsubscribe`, a client can indicate it is no longer
    actively working with a live Thread. If this is the only client
    subscribed to that given thread, the thread will be automatically closed
    by app-server, at which point the server will send `thread/closed` and
    `thread/status/changed` with `status: notLoaded` notifications.
    
    This gives clients a way to prevent long-running app-server processes
    from accumulating too many thread (and related) objects in memory.
    
    Closed threads will also be removed from `thread/loaded/list`.
  • Add app-server event tracing (#12695)
    To help with debugging
  • Feat: add model reroute notification (#12001)
    ### Summary
    Builiding off
    https://github.com/openai/codex/pull/11964/files/5c75aa7b89a70bc2cc410a6fd238749306ec4c5e#diff-058ae8f109a8b84b4b79bbfa45f522c2233b9d9e139696044ae374d50b6196e0,
    we have created a `model/rerouted` notification that captures the event
    so that consumers can render as expected. Keep the `EventMsg::Warning`
    path in core so that this does not affect TUI rendering.
    
    `model/rerouted` is meant to be generic to account for future usage
    including capacity planning etc.
  • fix(app-server): surface more helpful errors for json-rpc (#11638)
    Propagate client JSON-RPC errors for app-server request callbacks.
    Previously a number of possible errors were collapsed to `channel
    closed`. Now we should be able to see the underlying client error.
    
    ### Summary
    This change stops masking client JSON-RPC error responses as generic
    callback cancellation in app-server server->client request flows.
    
    Previously, when the client responded with a JSON-RPC error, we removed
    the callback entry but did not send anything to the waiting oneshot
    receiver. Waiters then observed channel closure (for example, auth
    refresh request canceled: channel closed), which hid the actual client
    error.
    
    Now, client JSON-RPC errors are forwarded through the callback channel
    and handled explicitly by request consumers.
    
    ### User-visible behavior
    - External auth refresh now surfaces real client JSON-RPC errors when
    provided.
    - True transport/callback-drop cases still report
    canceled/channel-closed semantics.
    
    ### Example: client JSON-RPC error is now propagated (not masked as
    "canceled")
    
    When app-server asks the client to refresh ChatGPT auth tokens, it sends
    a server->client JSON-RPC request like:
    
    ```json
    {
      "id": 42,
      "method": "account/chatgptAuthTokens/refresh",
      "params": {
        "reason": "unauthorized",
        "previousAccountId": "org-abc"
      }
    }
    ```
    
    If the client cannot refresh and responds with a JSON-RPC error:
    ```
    {
      "id": 42,
      "error": {
        "code": -32000,
        "message": "refresh failed",
        "data": null
      }
    }
    ```
    
    app-server now forwards that error through the callback path and
    surfaces:
    `auth refresh request failed: code=-32000 message=refresh failed`
    
    Previously, this same case could be reported as:
    `auth refresh request canceled: channel closed`
  • app-server: thread resume subscriptions (#11474)
    This stack layer makes app-server thread event delivery connection-aware
    so resumed/attached threads only emit notifications and approval prompts
    to subscribed connections.
    
    - Added per-thread subscription tracking in `ThreadState`
    (`subscribed_connections`) and mapped subscription ids to `(thread_id,
    connection_id)`.
    - Updated listener lifecycle so removing a subscription or closing a
    connection only removes that connection from the thread’s subscriber
    set; listener shutdown now happens when the last subscriber is gone.
    - Added `connection_closed(connection_id)` plumbing (`lib.rs` ->
    `message_processor.rs` -> `codex_message_processor.rs`) so disconnect
    cleanup happens immediately.
    - Scoped bespoke event handling outputs through `TargetedOutgoing` to
    send requests/notifications only to subscribed connections.
    - Kept existing threadresume behavior while aligning with the latest
    split-loop transport structure.
  • Reapply "Add app-server transport layer with websocket support" (#11370)
    Reapply "Add app-server transport layer with websocket support" with
    additional fixes from https://github.com/openai/codex/pull/11313/changes
    to avoid deadlocking.
    
    This reverts commit 47356ff83c.
    
    ## Summary
    
    To avoid deadlocking when queues are full, we maintain separate tokio
    tasks dedicated to incoming vs outgoing event handling
    - split the app-server main loop into two tasks in
    `run_main_with_transport`
       - inbound handling (`transport_event_rx`)
       - outbound handling (`outgoing_rx` + `thread_created_rx`)
    - separate incoming and outgoing websocket tasks
    
    ## Validation
    
    Integration tests, testing thoroughly e2e in codex app w/ >10 concurrent
    requests
    
    <img width="1365" height="979" alt="Screenshot 2026-02-10 at 2 54 22 PM"
    src="https://github.com/user-attachments/assets/47ca2c13-f322-4e5c-bedd-25859cbdc45f"
    />
    
    ---------
    
    Co-authored-by: jif-oai <jif@openai.com>
  • feat: support multiple rate limits (#11260)
    Added multi-limit support end-to-end by carrying limit_name in
    rate-limit snapshots and handling multiple buckets instead of only
    codex.
    Extended /usage client parsing to consume additional_rate_limits
    Updated TUI /status and in-memory state to store/render per-limit
    snapshots
    Extended app-server rate-limit read response: kept rate_limits and added
    rate_limits_by_name.
    Adjusted usage-limit error messaging for non-default codex limit buckets
  • feat: opt-out of events in the app-server (#11319)
    Add `optOutNotificationMethods` in the app-server to opt-out events
    based on exact method matching
  • Add app-server transport layer with websocket support (#10693)
    - Adds --listen <URL> to codex app-server with two listen modes:
          - stdio:// (default, existing behavior)
          - ws://IP:PORT (new websocket transport)
      - Refactors message routing to be connection-aware:
    - Tracks per-connection session state (initialize/experimental
    capability)
          - Routes responses/errors to the originating connection
    - Broadcasts server notifications/requests to initialized connections
    - Updates initialization semantics to be per connection (not
    process-global), and updates app-server docs accordingly.
    - Adds websocket accept/read/write handling (JSON-RPC per text frame,
    ping/pong handling, connection lifecycle events).
    
    Testing
    
    - Unit tests for transport URL parsing and targeted response/error
    routing.
      - New websocket integration test validating:
          - per-connection initialization requirements
          - no cross-connection response leakage
          - same request IDs on different connections route independently.
  • feat(app-server): support external auth mode (#10012)
    This enables a new use case where `codex app-server` is embedded into a
    parent application that will directly own the user's ChatGPT auth
    lifecycle, which means it owns the user’s auth tokens and refreshes it
    when necessary. The parent application would just want a way to pass in
    the auth tokens for codex to use directly.
    
    The idea is that we are introducing a new "auth mode" currently only
    exposed via app server: **`chatgptAuthTokens`** which consist of the
    `id_token` (stores account metadata) and `access_token` (the bearer
    token used directly for backend API calls). These auth tokens are only
    stored in-memory. This new mode is in addition to the existing `apiKey`
    and `chatgpt` auth modes.
    
    This PR reuses the shape of our existing app-server account APIs as much
    as possible:
    - Update `account/login/start` with a new `chatgptAuthTokens` variant,
    which will allow the client to pass in the tokens and have codex
    app-server use them directly. Upon success, the server emits
    `account/login/completed` and `account/updated` notifications.
    - A new server->client request called
    `account/chatgptAuthTokens/refresh` which the server can use whenever
    the access token previously passed in has expired and it needs a new one
    from the parent application.
    
    I leveraged the core 401 retry loop which typically triggers auth token
    refreshes automatically, but made it pluggable:
    - **chatgpt** mode refreshes internally, as usual.
    - **chatgptAuthTokens** mode calls the client via
    `account/chatgptAuthTokens/refresh`, the client responds with updated
    tokens, codex updates its in-memory auth, then retries. This RPC has a
    10s timeout and handles JSON-RPC errors from the client.
    
    Also some additional things:
    - chatgpt logins are blocked while external auth is active (have to log
    out first. typically clients will pick one OR the other, not support
    both)
    - `account/logout` clears external auth in memory
    - Ensures that if `forced_chatgpt_workspace_id` is set via the user's
    config, we respect it in both:
    - `account/login/start` with `chatgptAuthTokens` (returns a JSON-RPC
    error back to the client)
    - `account/chatgptAuthTokens/refresh` (fails the turn, and on next
    request app-server will send another `account/chatgptAuthTokens/refresh`
    request to the client).
  • Another round of improvements for config error messages (#9746)
    In a [recent PR](https://github.com/openai/codex/pull/9182), I made some
    improvements to config error messages so errors didn't leave app server
    clients in a dead state. This is a follow-on PR to make these error
    messages more readable and actionable for both TUI and GUI users. For
    example, see #9668 where the user was understandably confused about the
    source of the problem and how to fix it.
    
    The improved error message:
    1. Clearly identifies the config file where the error was found (which
    is more important now that we support layered configs)
    2. Provides a line and column number of the error
    3. Displays the line where the error occurred and underlines it
    
    For example, if my `config.toml` includes the following:
    ```toml
    [features]
    collaboration_modes = "true"
    ```
    
    Here's the current CLI error message:
    ```
    Error loading config.toml: invalid type: string "true", expected a boolean in `features`
    ```
    
    And here's the improved message:
    ```
    Error loading config.toml:
    /Users/etraut/.codex/config.toml:43:23: invalid type: string "true", expected a boolean
       |
    43 | collaboration_modes = "true"
       |                       ^^^^^^
    ```
    
    The bulk of the new logic is contained within a new module
    `config_loader/diagnostics.rs` that is responsible for calculating the
    text range for a given toml path (which is more involved than I would
    have expected).
    
    In addition, this PR adds the file name and text range to the
    `ConfigWarningNotification` app server struct. This allows GUI clients
    to present the user with a better error message and an optional link to
    open the errant config file. This was a suggestion from @.bolinfest when
    he reviewed my previous PR.
  • Improve handling of config and rules errors for app server clients (#9182)
    When an invalid config.toml key or value is detected, the CLI currently
    just quits. This leaves the VSCE in a dead state.
    
    This PR changes the behavior to not quit and bubble up the config error
    to users to make it actionable. It also surfaces errors related to
    "rules" parsing.
    
    This allows us to surface these errors to users in the VSCE, like this:
    
    <img width="342" height="129" alt="Screenshot 2026-01-13 at 4 29 22 PM"
    src="https://github.com/user-attachments/assets/a79ffbe7-7604-400c-a304-c5165b6eebc4"
    />
    
    <img width="346" height="244" alt="Screenshot 2026-01-13 at 4 45 06 PM"
    src="https://github.com/user-attachments/assets/de874f7c-16a2-4a95-8c6d-15f10482e67b"
    />
  • fix: taking plan type from usage endpoint instead of thru auth token (#7610)
    pull plan type from the usage endpoint, persist it in session state /
    tui state, and propagate through rate limit snapshots
  • storing credits (#6858)
    Expand the rate-limit cache/TUI: store credit snapshots alongside
    primary and secondary windows, render “Credits” when the backend reports
    they exist (unlimited vs rounded integer balances)
  • [App-server] Implement v2 for account/login/start and account/login/completed (#6183)
    This PR implements `account/login/start` and `account/login/completed`.
    Instead of having separate endpoints for login with chatgpt and api, we
    have a single enum handling different login methods. For sync auth
    methods like sign in with api key, we still send a `completed`
    notification back to be compatible with the async login flow.
  • [app-server] feat: export.rs supports a v2 namespace, initial v2 notifications (#6212)
    **Typescript and JSON schema exports**
    While working on Thread/Turn/Items type definitions, I realize we will
    run into name conflicts between v1 and v2 APIs (e.g. `RateLimitWindow`
    which won't be reusable since v1 uses `RateLimitWindow` from `protocol/`
    which uses snake_case, but we want to expose camelCase everywhere, so
    we'll define a V2 version of that struct that serializes as camelCase).
    
    To set us up for a clean and isolated v2 API, generate types into a
    `v2/` namespace for both typescript and JSON schema.
    - TypeScript: v2 types emit under `out_dir/v2/*.ts`, and root index.ts
    now re-exports them via `export * as v2 from "./v2"`;.
    - JSON Schemas: v2 definitions bundle under `#/definitions/v2/*` rather
    than the root.
    
    The location for the original types (v1 and types pulled from
    `protocol/` and other core crates) haven't changed and are still at the
    root. This is for backwards compatibility: no breaking changes to
    existing usages of v1 APIs and types.
    
    **Notifications**
    While working on export.rs, I:
    - refactored server/client notifications with macros (like we already do
    for methods) so they also get exported (I noticed they weren't being
    exported at all).
    - removed the hardcoded list of types to export as JSON schema by
    leveraging the existing macros instead
    - and took a stab at API V2 notifications. These aren't wired up yet,
    and I expect to iterate on these this week.
  • [App-server] v2 for account/updated and account/logout (#6175)
    V2 for `account/updated` and `account/logout` for app server. correspond
    to old `authStatusChange` and `LogoutChatGpt` respectively. Followup PRs
    will make other v2 endpoints call `account/updated` instead of
    `authStatusChange` too.
  • [app-server] remove serde(skip_serializing_if = "Option::is_none") annotations (#5939)
    We had this annotation everywhere in app-server APIs which made it so
    that fields get serialized as `field?: T`, meaning if the field as
    `None` we would omit the field in the payload. Removing this annotation
    changes it so that we return `field: T | null` instead, which makes
    codex app-server's API more aligned with the convention of public OpenAI
    APIs like Responses.
    
    Separately, remove the `#[ts(optional_fields = nullable)]` annotations
    that were recently added which made all the TS types become `field?: T |
    null` which is not great since clients need to handle undefined and
    null.
    
    I think generally it'll be best to have optional types be either:
    - `field: T | null` (preferred, aligned with public OpenAI APIs)
    - `field?: T` where we have to, such as types generated from the MCP
    schema:
    https://github.com/modelcontextprotocol/modelcontextprotocol/blob/main/schema/2025-06-18/schema.ts
    (see changes to `mcp-types/`)
    
    I updated @etraut-openai's unit test to check that all generated TS
    types are one or the other, not both (so will error if we have a type
    that has `field?: T | null`). I don't think there's currently a good use
    case for that - but we can always revisit.
  • [app-server] send account/rateLimits/updated notifications (#5477)
    Codex will now send an `account/rateLimits/updated` notification
    whenever the user's rate limits are updated.
    
    This is implemented by just transforming the existing TokenCount event.
  • fix: remove mcp-types from app server protocol (#4537)
    We continue the separation between `codex app-server` and `codex
    mcp-server`.
    
    In particular, we introduce a new crate, `codex-app-server-protocol`,
    and migrate `codex-rs/protocol/src/mcp_protocol.rs` into it, renaming it
    `codex-rs/app-server-protocol/src/protocol.rs`.
    
    Because `ConversationId` was defined in `mcp_protocol.rs`, we move it
    into its own file, `codex-rs/protocol/src/conversation_id.rs`, and
    because it is referenced in a ton of places, we have to touch a lot of
    files as part of this PR.
    
    We also decide to get away from proper JSON-RPC 2.0 semantics, so we
    also introduce `codex-rs/app-server-protocol/src/jsonrpc_lite.rs`, which
    is basically the same `JSONRPCMessage` type defined in `mcp-types`
    except with all of the `"jsonrpc": "2.0"` removed.
    
    Getting rid of `"jsonrpc": "2.0"` makes our serialization logic
    considerably simpler, as we can lean heavier on serde to serialize
    directly into the wire format that we use now.
  • fix: use macros to ensure request/response symmetry (#4529)
    Manually curating `protocol-ts/src/lib.rs` was error-prone, as expected.
    I finally asked Codex to write some Rust macros so we can ensure that:
    
    - For every variant of `ClientRequest` and `ServerRequest`, there is an
    associated `params` and `response` type.
    - All response types are included automatically in the output of `codex
    generate-ts`.
  • fix: separate codex mcp into codex mcp-server and codex app-server (#4471)
    This is a very large PR with some non-backwards-compatible changes.
    
    Historically, `codex mcp` (or `codex mcp serve`) started a JSON-RPC-ish
    server that had two overlapping responsibilities:
    
    - Running an MCP server, providing some basic tool calls.
    - Running the app server used to power experiences such as the VS Code
    extension.
    
    This PR aims to separate these into distinct concepts:
    
    - `codex mcp-server` for the MCP server
    - `codex app-server` for the "application server"
    
    Note `codex mcp` still exists because it already has its own subcommands
    for MCP management (`list`, `add`, etc.)
    
    The MCP logic continues to live in `codex-rs/mcp-server` whereas the
    refactored app server logic is in the new `codex-rs/app-server` folder.
    Note that most of the existing integration tests in
    `codex-rs/mcp-server/tests/suite` were actually for the app server, so
    all the tests have been moved with the exception of
    `codex-rs/mcp-server/tests/suite/mod.rs`.
    
    Because this is already a large diff, I tried not to change more than I
    had to, so `codex-rs/app-server/tests/common/mcp_process.rs` still uses
    the name `McpProcess` for now, but I will do some mechanical renamings
    to things like `AppServer` in subsequent PRs.
    
    While `mcp-server` and `app-server` share some overlapping functionality
    (like reading streams of JSONL and dispatching based on message types)
    and some differences (completely different message types), I ended up
    doing a bit of copypasta between the two crates, as both have somewhat
    similar `message_processor.rs` and `outgoing_message.rs` files for now,
    though I expect them to diverge more in the near future.
    
    One material change is that of the initialize handshake for `codex
    app-server`, as we no longer use the MCP types for that handshake.
    Instead, we update `codex-rs/protocol/src/mcp_protocol.rs` to add an
    `Initialize` variant to `ClientRequest`, which takes the `ClientInfo`
    object we need to update the `USER_AGENT_SUFFIX` in
    `codex-rs/app-server/src/message_processor.rs`.
    
    One other material change is in
    `codex-rs/app-server/src/codex_message_processor.rs` where I eliminated
    a use of the `send_event_as_notification()` method I am generally trying
    to deprecate (because it blindly maps an `EventMsg` into a
    `JSONNotification`) in favor of `send_server_notification()`, which
    takes a `ServerNotification`, as that is intended to be a custom enum of
    all notification types supported by the app server. So to make this
    update, I had to introduce a new variant of `ServerNotification`,
    `SessionConfigured`, which is a non-backwards compatible change with the
    old `codex mcp`, and clients will have to be updated after the next
    release that contains this PR. Note that
    `codex-rs/app-server/tests/suite/list_resume.rs` also had to be update
    to reflect this change.
    
    I introduced `codex-rs/utils/json-to-toml/src/lib.rs` as a small utility
    crate to avoid some of the copying between `mcp-server` and
    `app-server`.