## Summary
- Remove `perCwdExtraUserRoots` / `SkillsListExtraRootsForCwd` from the
`skills/list` app-server API.
- Drop Rust app-server and `codex-core-skills` extra-root plumbing so
skill scans are keyed by the normal cwd/user/plugin roots only.
- Regenerate app-server schemas and update docs/tests that only existed
for the removed extra-roots behavior.
## Validation
- `just write-app-server-schema`
- `just fmt`
- `cargo test -p codex-app-server-protocol`
- `cargo test -p codex-core-skills`
- `just fix -p codex-app-server-protocol`
- `just fix -p codex-core-skills`
- `just fix -p codex-app-server`
- `just fix -p codex-tui`
## Notes
- `cargo test -p codex-app-server --test all skills_list` ran the edited
skills-list cases, but the full filtered run ended on existing
`skills_changed_notification_is_emitted_after_skill_change` timeout
after a websocket `401`.
- `cargo test -p codex-tui --lib` compiled the changed TUI callers, then
failed two unrelated status permission tests because local
`/etc/codex/requirements.toml` forbids `DangerFullAccess`.
- Source-truth check found the OpenAI monorepo still has
generated/app-server-kit mirror references to the removed field; those
should be cleaned up when generated app-server types are synced or in a
companion OpenAI cleanup.
## Why
`argument-comment-lint` was green in CI even though the repo still had
many uncommented literal arguments. The main gap was target coverage:
the repo wrapper did not force Cargo to inspect test-only call sites, so
examples like the `latest_session_lookup_params(true, ...)` tests in
`codex-rs/tui_app_server/src/lib.rs` never entered the blocking CI path.
This change cleans up the existing backlog, makes the default repo lint
path cover all Cargo targets, and starts rolling that stricter CI
enforcement out on the platform where it is currently validated.
## What changed
- mechanically fixed existing `argument-comment-lint` violations across
the `codex-rs` workspace, including tests, examples, and benches
- updated `tools/argument-comment-lint/run-prebuilt-linter.sh` and
`tools/argument-comment-lint/run.sh` so non-`--fix` runs default to
`--all-targets` unless the caller explicitly narrows the target set
- fixed both wrappers so forwarded cargo arguments after `--` are
preserved with a single separator
- documented the new default behavior in
`tools/argument-comment-lint/README.md`
- updated `rust-ci` so the macOS lint lane keeps the plain wrapper
invocation and therefore enforces `--all-targets`, while Linux and
Windows temporarily pass `-- --lib --bins`
That temporary CI split keeps the stricter all-targets check where it is
already cleaned up, while leaving room to finish the remaining Linux-
and Windows-specific target-gated cleanup before enabling
`--all-targets` on those runners. The Linux and Windows failures on the
intermediate revision were caused by the wrapper forwarding bug, not by
additional lint findings in those lanes.
## Validation
- `bash -n tools/argument-comment-lint/run.sh`
- `bash -n tools/argument-comment-lint/run-prebuilt-linter.sh`
- shell-level wrapper forwarding check for `-- --lib --bins`
- shell-level wrapper forwarding check for `-- --tests`
- `just argument-comment-lint`
- `cargo test` in `tools/argument-comment-lint`
- `cargo test -p codex-terminal-detection`
## Follow-up
- Clean up remaining Linux-only target-gated callsites, then switch the
Linux lint lane back to the plain wrapper invocation.
- Clean up remaining Windows-only target-gated callsites, then switch
the Windows lint lane back to the plain wrapper invocation.
## Why
Skill metadata accepted a `permissions` block and stored the result on
`SkillMetadata`, but that data was never consumed by runtime behavior.
Leaving the dead parsing path in place makes it look like skills can
widen or otherwise influence execution permissions when, in practice,
declared skill permissions are ignored.
This change removes that misleading surface area so the skill metadata
model matches what the system actually uses.
## What changed
- removed `permission_profile` and `managed_network_override` from
`core-skills::SkillMetadata`
- stopped parsing `permissions` from skill metadata in
`core-skills/src/loader.rs`
- deleted the loader tests that only exercised the removed permissions
parsing path
- cleaned up dependent `SkillMetadata` constructors in tests and TUI
code that were only carrying `None` for those fields
## Testing
- `cargo test -p codex-core-skills`
- `cargo test -p codex-tui
submission_prefers_selected_duplicate_skill_path`
- `just argument-comment-lint`
## Summary
- move skill loading and management into codex-core-skills
- leave codex-core with the thin integration layer and shared wiring
## Testing
- CI
---------
Co-authored-by: Codex <noreply@openai.com>
xli-oaiandGitHub
alexsong-oaiandGitHub
pakrym-oaiandGitHub
Michael BolinandGitHub
