## Description
This PR adds a new `historyMode = "legacy" | "paginated"` to `Thread`.
This will be stored in `SessionMeta` in the JSONL rollout file and as a
new column in the SQLite thread_metadata table, and exposed on
`thread/start` and on the `Thread` object in app-server.
## What changed
- Added canonical `ThreadHistoryMode` with `legacy` and `paginated`,
defaulting old and new SessionMeta to `legacy`.
- Carried `history_mode` through core session config, ThreadStore stored
metadata, local/in-memory stores, rollout metadata extraction, and the
existing SQLite `threads` table.
- Added experimental `historyMode` to app-server v2 `Thread` and
`thread/start`.
- Made paginated stored threads metadata-discoverable but unsupported
for legacy full-history reads, `load_history`, live resume, and create
paths.
- Regenerated app-server schema fixtures and added
protocol/state/thread-store/app-server coverage for persistence and
fail-closed behavior.
## Compatibility floor
Because users may be running various versions of Codex binaries on the
same machine (TUI, Codex App, etc.), we will need to establish a
compatibility floor for upcoming paginated threads, which will change
how thread storage reads and writes work.
The overall plan here:
```
Release N:
- Add historyMode to SessionMeta / Thread / SQLite metadata.
- Teach binaries to understand paginated threads.
- If a binary sees `historyMode="paginated"` but does not support the paginated contract, it refuses to resume/mutate the thread.
- Default remains `"legacy"`.
Release N+1:
- First-party clients start opting into paginated threads where appropriate.
- Internal dogfood / staged rollout.
- Measure old-client usage and paginated-thread unsupported errors.
Release N+2:
- Only after Release N+ is overwhelmingly deployed, make paginated the default.
- Accept that a small tail of N-1-or-older binaries may not understand paginated threads.
```
The important behavior change is fail-closed handling for a binary that
encounters a persisted `paginated` thread before it knows how to fully
support paginated history. In app-server, if a thread is `paginated`, we
will:
- allow metadata-only discovery paths like `thread/list` and
`thread/read(includeTurns=false)`, so clients can still see the thread
and inspect its `historyMode`
- reject legacy full-history/live-thread paths like
`thread/read(includeTurns=true)` and `thread/resume` with an unsupported
JSON-RPC error
- avoid silently treating an unknown or future `historyMode` as `legacy`
Under the hood, the ThreadStore layer also rejects legacy operations
that would need to load or replay the full thread history for a
paginated thread. That gives us the behavior we want for Release N:
future paginated threads are visible, but this binary fails closed
instead of trying to operate on them as if they were legacy threads.
## Why
`selectedCapabilityRoots` is durable thread intent: “use this capability
root from environment `worker`.”
The important product assumption is:
> One environment ID always names the same logical executor and stable
contents.
`worker` does not silently change from executor A to an unrelated
executor B. The process-local connection handle for `worker` can still
be replaced while Codex is running, though, for example when
`environment/add` registers a fresh handle for the same logical
environment.
The thread should persist only the stable selection. Each model step
should pair that selection with the exact ready handle captured for that
step.
## The boundary
```text
persisted thread intent
plugin@1 -> environment "worker"
|
| capture the current step
v
model-step view
unavailable, or
plugin@1 + worker's exact captured ready handle
```
The environment ID is the stable identity and cache key. The
`Arc<Environment>` is only a process-local handle retained so consumers
of one model step use the same captured environment. It is never
persisted and it does not imply different environment contents.
## What changes
### Persist the stable selection
Selected roots are written into `SessionMeta` and restored with the
thread. Forked subagents inherit the same selections, including
bounded-history forks.
Only stable data is persisted: root ID, environment ID, and root path.
### Capture readiness together with the exact handle
The environment snapshot records:
```rust
environment_id -> Some(Arc<Environment>) // ready in this step
environment_id -> None // still starting in this step
```
This prevents readiness and execution from coming from different
registry snapshots.
For example:
```text
step snapshot: worker -> handle A, ready
environment/add: worker -> fresh handle B for the same logical environment
current step: plugin@1 still uses captured handle A
```
Without carrying handle A in the snapshot, the resolver could combine “A
was ready” with handle B and treat B as ready before it had finished
starting.
This does not change cache invalidation. Stable capability metadata
remains identified by environment ID and capability root. Replacing a
process-local handle under the same stable environment ID does not
invalidate or rediscover that metadata.
### Resolve availability per model step
- A ready captured environment produces resolved roots using its
captured handle.
- A starting, missing, or failed environment is omitted from that step.
- A selected lazy environment that is outside the turn's captured
environment set is asked to start, and a later step can observe it as
ready.
- No capability files are scanned here.
Transient transport disconnects remain the remote client's reconnect
concern. This PR models initial attachment/readiness; it does not add
live socket-connectivity state.
## Example
```text
thread selection: plugin@1 -> environment "worker"
step 1: worker is starting -> plugin@1 unavailable
step 2: worker is ready -> plugin@1 resolves through worker's captured handle
step 3: fresh local handle -> current step remains pinned; a later step captures its own view
```
Temporary unavailability does not discard the durable selection. Later
PRs can retain stable metadata caches while projecting only currently
available capabilities into model-visible World State.
## Compatibility
The app-server request shape does not change. Older rollouts without
`selected_capability_roots` deserialize to an empty list.
## Stack
1. **This PR:** persist stable selected roots and resolve them through
an exact model-step handle.
2. #29960: cache stable skill metadata and project available skills into
World State.
3. #29946: cache stable plugin declarations and manage the separate live
MCP runtime.
## Why
PR #29494 made context-window IDs visible to the model by wrapping the
token-budget window payload in `<context_window>`, but rollout JSONL
consumers still could not see the initial window identity by tailing the
session file. Compacted rollout items carry window IDs only after
compaction has happened, so a session with no compaction had no durable
JSONL record for window 0.
This change gives tailing consumers a stable initial-window record at
session creation time.
## What Changed
- Added `session_meta.context_window.window_id` for the initial
context-window identity.
- `CreateThreadParams` now requires `initial_window_id: String`, so
thread-store callers cannot accidentally create new threads without
window-0 metadata.
- Live thread creation derives the persisted initial window ID from the
same `AutoCompactWindowIds` used to initialize `SessionState`, keeping
runtime state and JSONL metadata aligned.
- Rollout reconstruction uses `session_meta.context_window.window_id` as
the initial-window fallback and derives `window_number = 0`,
`first_window_id = window_id`, and `previous_window_id = None`
internally.
- Fork reconstruction intentionally uses the same rollout reconstruction
path; consumers that need to distinguish copied initial-window metadata
can use the rollout `thread_id`.
- Legacy compactions without `window_number` still use compaction-count
fallback accounting instead of being reset to window 0 by the
initial-window fallback.
- Compacted rollout metadata still takes precedence once compaction
records exist, preserving the richer chain fields there.
## JSONL Shape
Real rollout JSONL is one object per line. This example is expanded for
readability, but shows the new initial `session_meta.context_window`
record followed by the existing compacted rollout item shape that also
carries window IDs:
```jsonl
{
"timestamp": "2026-06-22T12:00:00.000Z",
"type": "session_meta",
"payload": {
"session_id": "<THREAD_ID>",
"id": "<THREAD_ID>",
"timestamp": "2026-06-22T12:00:00.000Z",
"cwd": "/repo",
"originator": "codex",
"cli_version": "0.0.0",
"source": "cli",
"model_provider": "<MODEL_PROVIDER>",
"context_window": {
"window_id": "<INITIAL_WINDOW_ID>"
}
}
}
...
{
"timestamp": "2026-06-22T12:34:56.000Z",
"type": "compacted",
"payload": {
"message": "<COMPACTION_SUMMARY>",
"replacement_history": [
"..."
],
"window_number": 1,
"first_window_id": "<INITIAL_WINDOW_ID>",
"previous_window_id": "<INITIAL_WINDOW_ID>",
"window_id": "<NEXT_WINDOW_ID>"
}
}
```
The nested `context_window` object is intentional: it gives rollout
consumers a stable namespace for context-window metadata while only
writing the non-derivable initial `window_id`. For the initial window,
`window_number`, `first_window_id`, and `previous_window_id` are derived
internally instead of being written to the rollout.
## Verification
- `just test -p codex-protocol`
- `just test -p codex-rollout
recorder_materializes_on_flush_with_pending_items`
- `just test -p codex-core reconstruct_history`
- `just test -p codex-core
record_initial_history_reconstructs_forked_transcript`
- `just test -p codex-thread-store`
- `just test -p codex-state`
- `just test -p codex-app-server
thread_read_returns_summary_without_turns`
- `just test -p codex-rollout persistence_metrics`
## Summary
A cold-resumed subagent kept its durable thread ID but could receive a
new session ID, splitting one agent tree across multiple sessions after
a restart.
Persist the root session ID in every rollout `SessionMeta`, carry it
through thread creation, and restore it before initializing the resumed
`Session` and `AgentControl`.
## Behavior
For a nested agent tree:
```text
root session R
parent thread P
child thread C
```
The child rollout stores:
```text
session_id: R
parent_thread_id: P
id: C
```
After a cold resume, the child still belongs to root session `R` while
its immediate parent remains `P`. The integration coverage uses distinct
values for all three IDs so it catches restoring the session from
`parent_thread_id`.
## Legacy rollouts
Previous rollouts have `id` but no `session_id`. `SessionMetaLine`
deserialization treats a missing `session_id` as `id`, keeping those
files readable, listable, and resumable. When a legacy subagent is
resumed through its root, that synthesized child ID no longer overrides
the inherited root-scoped `AgentControl`. New rollouts always persist
the explicit root session ID.
Stack split from #25708. Original PR intentionally left open. This first
PR adds the multi-agent runtime metadata types and catalog plumbing used
by the rest of the stack.
## Why
This PR
https://github.com/openai/codex/pull/24161#discussion_r3325692763
revealed a subagent data modeling issue, where we overloaded
`forked_from_id` to also mean `parent_thread_id`. That's incorrect since
guardian and review subagents can be a subagent and NOT fork the main
thread's history.
The solution here is to explicitly store a new `parent_thread_id` on
`SessionMeta`, alongside `forked_from_id` which already exists. While
we're at it, also expose it in the app-server protocol on the `Thread`
object.
A thread->subagent relationship and a fork of thread history are
orthogonal concepts.
## What Changed
- Added top-level `parent_thread_id` persistence on `SessionMeta` and
runtime/session plumbing through `SessionConfiguredEvent`,
`CodexSpawnArgs`, `SessionConfiguration`, `ThreadConfigSnapshot`,
`TurnContext`, and `ModelClient`.
- Made turn metadata, request headers, analytics, and subagent-start
events read the separate runtime/top-level parent field instead of
deriving general parent lineage from `SessionSource` or
`forked_from_thread_id`.
- Passed parent lineage separately at delegated subagent, review,
guardian, agent-job, and multi-agent spawn construction sites;
copied-history fork lineage remains derived only from `InitialHistory`.
- Persisted and exposed parent lineage through rollout/thread-store
projections and app-server v2 `Thread.parentThreadId`.
- Updated app-server README text and regenerated app-server schema
fixtures for the additive `parentThreadId` response field.
## Summary
- make `thread_source` an explicit optional thread-level field on
`thread/start`, `thread/fork`, and returned thread payloads
- persist `thread_source` in rollout/session metadata so resumed live
threads retain the original value
- replace the old best-effort `session_source` -> `thread_source`
mapping with an explicit caller-supplied analytics classification
## Why
Before this change, analytics `thread_source` was populated by a
best-effort mapping from `session_source`. `session_source` describes
the runtime/client surface, not the actual thread-level origin, so that
projection was not accurate enough to distinguish cases such as `user`,
`subagent`, `memory_consolidation`, and future thread origins reliably.
Making `thread_source` explicit keeps one thread-level analytics field
while letting callers provide the real classification directly instead
of recovering it indirectly from `session_source`.
## Impact
For new analytics events, `thread_source` now reflects the explicit
thread-level classification supplied by the caller rather than an
inferred value derived from `session_source`. Existing protocol fields
remain optional; callers that omit `threadSource` now produce `null`
instead of a best-effort inferred value.
## Validation
- `just write-app-server-schema`
- `cargo test -p codex-analytics -p codex-core -p
codex-app-server-protocol --no-run`
- `cargo test -p codex-app-server-protocol
generated_ts_optional_nullable_fields_only_in_params`
- `cargo test -p codex-analytics
thread_initialized_event_serializes_expected_shape`
- `cargo test -p codex-core
resume_stopped_thread_from_rollout_preserves_thread_source`
## Problem
When a user resumed or forked a session, the TUI could render the
restored thread history immediately, but it did not receive token usage
until a later model turn emitted a fresh usage event. That left the
context/status UI blank or stale during the exact window where the user
expects resumed state to look complete. Core already reconstructed token
usage from the rollout; the missing behavior was app-server lifecycle
replay to the client that just attached.
## Mental model
Token usage has two representations. The rollout is the durable source
of historical `TokenCount` events, and the core session cache is the
in-memory snapshot reconstructed from that rollout on resume or fork.
App-server v2 clients do not read core state directly; they learn about
usage through `thread/tokenUsage/updated`. The fix keeps those roles
separate: core exposes the restored `TokenUsageInfo`, and app-server
sends one targeted notification after a successful `thread/resume` or
`thread/fork` response when that restored snapshot exists.
This notification is not a new model event. It is a replay of
already-persisted state for the client that just attached. That
distinction matters because using the normal core event path here would
risk duplicating `TokenCount` entries in the rollout and making future
resumes count historical usage twice.
## Non-goals
This change does not add a new protocol method or payload shape. It
reuses the existing v2 `thread/tokenUsage/updated` notification and the
TUI’s existing handler for that notification.
This change does not alter how token usage is computed, accumulated,
compacted, or written during turns. It only exposes the token usage that
resume and fork reconstruction already restored.
This change does not broadcast historical usage replay to every
subscribed client. The replay is intentionally scoped to the connection
that requested resume or fork so already-attached clients are not
surprised by an old usage update while they may be rendering live
activity.
## Tradeoffs
Sending the usage notification after the JSON-RPC response preserves a
clear lifecycle order: the client first receives the thread object, then
receives restored usage for that thread. The tradeoff is that usage is
still a notification rather than part of the `thread/resume` or
`thread/fork` response. That keeps the protocol shape stable and avoids
duplicating usage fields across response types, but clients must
continue listening for notifications after receiving the response.
The helper selects the latest non-in-progress turn id for the replayed
usage notification. This is conservative because restored usage belongs
to completed persisted accounting, not to newly attached in-flight work.
The fallback to the last turn preserves a stable wire payload for
unusual histories, but histories with no meaningful completed turn still
have a weak attribution story.
## Architecture
Core already seeds `Session` token state from the last persisted rollout
`TokenCount` during `InitialHistory::Resumed` and
`InitialHistory::Forked`. The new core accessor exposes the complete
`TokenUsageInfo` through `CodexThread` without giving app-server direct
session mutation authority.
App-server calls that accessor from three lifecycle paths: cold
`thread/resume`, running-thread resume/rejoin, and `thread/fork`. In
each path, the server sends the normal response first, then calls a
shared helper that converts core usage into
`ThreadTokenUsageUpdatedNotification` and sends it only to the
requesting connection.
The tests build fake rollouts with a user turn plus a persisted token
usage event. They then exercise `thread/resume` and `thread/fork`
without starting another model turn, proving that restored usage arrives
before any next-turn token event could be produced.
## Observability
The primary debug path is the app-server JSON-RPC stream. After
`thread/resume` or `thread/fork`, a client should see the response
followed by `thread/tokenUsage/updated` when the source rollout includes
token usage. If the notification is absent, check whether the rollout
contains an `event_msg` payload of type `token_count`, whether core
reconstruction seeded `Session::token_usage_info`, and whether the
connection stayed attached long enough to receive the targeted
notification.
The notification is sent through the existing
`OutgoingMessageSender::send_server_notification_to_connections` path,
so existing app-server tracing around server notifications still
applies. Because this is a replay, not a model turn event, debugging
should start at the resume/fork handlers rather than the turn event
translation in `bespoke_event_handling`.
## Tests
The focused regression coverage is `cargo test -p codex-app-server
emits_restored_token_usage`, which covers both resume and fork. The core
reconstruction guard is `cargo test -p codex-core
record_initial_history_seeds_token_info_from_rollout`.
Formatting and lint/fix passes were run with `just fmt`, `just fix -p
codex-core`, and `just fix -p codex-app-server`. Full crate test runs
surfaced pre-existing unrelated failures in command execution and plugin
marketplace tests; the new token usage tests passed in focused runs and
within the app-server suite before the unrelated command execution
failure.
This PR add an URI-based system to reference agents within a tree. This
comes from a sync between research and engineering.
The main agent (the one manually spawned by a user) is always called
`/root`. Any sub-agent spawned by it will be `/root/agent_1` for example
where `agent_1` is chosen by the model.
Any agent can contact any agents using the path.
Paths can be used either in absolute or relative to the calling agents
Resume is not supported for now on this new path
Add dynamic tools to rollout file for persistence & read from rollout on
resume. Ran a real example and spotted the following in the rollout
file:
```
{"timestamp":"2026-01-29T01:27:57.468Z","type":"session_meta","payload":{"id":"019c075d-3f0b-77e3-894e-c1c159b04b1e","timestamp":"2026-01-29T01:27:57.451Z","...."dynamic_tools":[{"name":"demo_tool","description":"Demo dynamic tool","inputSchema":{"additionalProperties":false,"properties":{"city":{"type":"string"}},"required":["city"],"type":"object"}}],"git":{"commit_hash":"ebc573f15c01b8af158e060cfedd401f043e9dfa","branch":"dev/cc/dynamic-tools","repository_url":"https://github.com/openai/codex.git"}}}
```
## Summary
This PR consolidates base_instructions onto SessionMeta /
SessionConfiguration, so we ensure `base_instructions` is set once per
session and should be (mostly) immutable, unless:
- overridden by config on resume / fork
- sub-agent tasks, like review or collab
In a future PR, we should convert all references to `base_instructions`
to consistently used the typed struct, so it's less likely that we put
other strings there. See #9423. However, this PR is already quite
complex, so I'm deferring that to a follow-up.
## Testing
- [x] Added a resume test to assert that instructions are preserved. In
particular, `resume_switches_models_preserves_base_instructions` fails
against main.
Existing test coverage thats assert base instructions are preserved
across multiple requests in a session:
- Manual compact keeps baseline instructions:
core/tests/suite/compact.rs:199
- Auto-compact keeps baseline instructions:
core/tests/suite/compact.rs:1142
- Prompt caching reuses the same instructions across two requests:
core/tests/suite/prompt_caching.rs:150 and
core/tests/suite/prompt_caching.rs:157
- Prompt caching with explicit expected string across two requests:
core/tests/suite/prompt_caching.rs:213 and
core/tests/suite/prompt_caching.rs:222
- Resume with model switch keeps original instructions:
core/tests/suite/resume.rs:136
- Compact/resume/fork uses request 0 instructions for later expected
payloads: core/tests/suite/compact_resume_fork.rs:215
### Description
- Remove the now-unused `instructions` field from the session metadata
to simplify SessionMeta and stop propagating transient instruction text
through the rollout recorder API. This was only saving
user_instructions, and was never being read.
- Stop passing user instructions into the rollout writer at session
creation so the rollout header only contains canonical session metadata.
### Testing
- Ran `just fmt` which completed successfully.
- Ran `just fix -p codex-protocol`, `just fix -p codex-core`, `just fix
-p codex-app-server`, `just fix -p codex-tui`, and `just fix -p
codex-tui2` which completed (Clippy fixes applied) as part of
verification.
- Ran `cargo test -p codex-protocol` which passed (28 tests).
- Ran `cargo test -p codex-core` which showed failures in a small set of
tests (not caused by the protocol type change directly):
`default_client::tests::test_create_client_sets_default_headers`,
several `models_manager::manager::tests::refresh_available_models_*`,
and `shell_snapshot::tests::linux_sh_snapshot_includes_sections` (these
tests failed in this CI run).
- Ran `cargo test -p codex-app-server` which reported several failing
integration tests (including
`suite::codex_message_processor_flow::test_codex_jsonrpc_conversation_flow`,
`suite::output_schema::send_user_turn_*`, and
`suite::user_agent::get_user_agent_returns_current_codex_user_agent`).
- `cargo test -p codex-tui` and `cargo test -p codex-tui2` were
attempted but aborted due to disk space exhaustion (`No space left on
device`).
------
[Codex
Task](https://chatgpt.com/codex/tasks/task_i_696bd8ce632483228d298cf07c7eb41c)
Summary:
- Add forked_from to SessionMeta/SessionConfiguredEvent and persist it
for forked sessions.
- Surface forked_from in /status for tui + tui2 and add snapshots.
Add support for returning threads by either `created_at` OR `updated_at`
descending. Previously core always returned threads ordered by
`created_at`.
This PR:
- updates core to be able to list threads by `updated_at` OR
`created_at` descending based on what the caller wants
- also update `thread/list` in app-server to expose this (default to
`created_at` if not specified)
All existing codepaths (app-server, TUI) still default to `created_at`,
so no behavior change is expected with this PR.
**Implementation**
To sort by `updated_at` is a bit nontrivial (whereas `created_at` is
easy due to the way we structure the folders and filenames on disk,
which are all based on `created_at`).
The most naive way to do this without introducing a cache file or sqlite
DB (which we have to implement/maintain) is to scan files in reverse
`created_at` order on disk, and look at the file's mtime (last modified
timestamp according to the filesystem) until we reach `MAX_SCAN_FILES`
(currently set to 10,000). Then, we can return the most recent N
threads.
Based on some quick and dirty benchmarking on my machine with ~1000
rollout files, calling `thread/list` with limit 50, the `updated_at`
path is slower as expected due to all the I/O:
- updated-at: average 103.10 ms
- created-at: average 41.10 ms
Those absolute numbers aren't a big deal IMO, but we can certainly
optimize this in a followup if needed by introducing more state stored
on disk.
**Caveat**
There's also a limitation in that any files older than `MAX_SCAN_FILES`
will be excluded, which means if a user continues a REALLY old thread,
it's possible to not be included. In practice that should not be too big
of an issue.
If a user makes...
- 1000 rollouts/day → threads older than 10 days won't show up
- 100 rollouts/day → ~100 days
If this becomes a problem for some reason, even more motivation to
implement an updated_at cache.
The second part of breaking up PR
https://github.com/openai/codex/pull/9116
Summary:
- Add `TextElement` / `ByteRange` to protocol user inputs and user
message events with defaults.
- Thread `text_elements` through app-server v1/v2 request handling and
history rebuild.
- Preserve UI metadata only in user input/events (not `ContentItem`)
while keeping local image attachments in user events for rehydration.
Details:
- Protocol: `UserInput::Text` carries `text_elements`;
`UserMessageEvent` carries `text_elements` + `local_images`.
Serialization includes empty vectors for backward compatibility.
- app-server-protocol: v1 defines `V1TextElement` / `V1ByteRange` in
camelCase with conversions; v2 uses its own camelCase wrapper.
- app-server: v1/v2 input mapping includes `text_elements`; thread
history rebuilds include them.
- Core: user event emission preserves UI metadata while model history
stays clean; history replay round-trips the metadata.
Implements:
```
thread/list
thread/start
thread/resume
thread/archive
```
along with their integration tests. These are relatively light wrappers
around the existing core logic, and changes to core logic are minimal.
However, an improvement made for developer ergonomics:
- `thread/start` and `thread/resume` automatically attaches a
conversation listener internally, so clients don't have to make a
separate `AddConversationListener` call like they do today.
For consistency, also updated `model/list` and `feedback/upload` (naming
conventions, list API params).
Owen LinandGitHub
jifandGitHub
Michael BolinandGitHub
rhan-oaiandGitHub
Felipe CouryandGitHub
Dylan HurdandGitHub
Ahmed IbrahimandGitHub
Celia ChenandGitHub
Anton PanasenkoandGitHub
charley-oaiandGitHub