109 Commits

  • feat(app-server): add history_mode to thread (#29927)
    ## Description
    
    This PR adds a new `historyMode = "legacy" | "paginated"` to `Thread`.
    This will be stored in `SessionMeta` in the JSONL rollout file and as a
    new column in the SQLite thread_metadata table, and exposed on
    `thread/start` and on the `Thread` object in app-server.
    
    ## What changed
    
    - Added canonical `ThreadHistoryMode` with `legacy` and `paginated`,
    defaulting old and new SessionMeta to `legacy`.
    - Carried `history_mode` through core session config, ThreadStore stored
    metadata, local/in-memory stores, rollout metadata extraction, and the
    existing SQLite `threads` table.
    - Added experimental `historyMode` to app-server v2 `Thread` and
    `thread/start`.
    - Made paginated stored threads metadata-discoverable but unsupported
    for legacy full-history reads, `load_history`, live resume, and create
    paths.
    - Regenerated app-server schema fixtures and added
    protocol/state/thread-store/app-server coverage for persistence and
    fail-closed behavior.
    
    ## Compatibility floor
    Because users may be running various versions of Codex binaries on the
    same machine (TUI, Codex App, etc.), we will need to establish a
    compatibility floor for upcoming paginated threads, which will change
    how thread storage reads and writes work.
    
    The overall plan here:
    ```
    Release N:
    - Add historyMode to SessionMeta / Thread / SQLite metadata.
    - Teach binaries to understand paginated threads.
    - If a binary sees `historyMode="paginated"` but does not support the paginated contract, it refuses to resume/mutate the thread.
    - Default remains `"legacy"`.
    
    Release N+1:
    - First-party clients start opting into paginated threads where appropriate.
    - Internal dogfood / staged rollout.
    - Measure old-client usage and paginated-thread unsupported errors.
    
    Release N+2:
    - Only after Release N+ is overwhelmingly deployed, make paginated the default.
    - Accept that a small tail of N-1-or-older binaries may not understand paginated threads.
    ```
    
    The important behavior change is fail-closed handling for a binary that
    encounters a persisted `paginated` thread before it knows how to fully
    support paginated history. In app-server, if a thread is `paginated`, we
    will:
    
    - allow metadata-only discovery paths like `thread/list` and
    `thread/read(includeTurns=false)`, so clients can still see the thread
    and inspect its `historyMode`
    - reject legacy full-history/live-thread paths like
    `thread/read(includeTurns=true)` and `thread/resume` with an unsupported
    JSON-RPC error
    - avoid silently treating an unknown or future `historyMode` as `legacy`
    
    Under the hood, the ThreadStore layer also rejects legacy operations
    that would need to load or replay the full thread history for a
    paginated thread. That gives us the behavior we want for Release N:
    future paginated threads are visible, but this binary fails closed
    instead of trying to operate on them as if they were legacy threads.
  • Expose MCP app identity in app context (#29934)
    ## Why
    
    MCP tool-call events need to expose trusted app identity and action
    metadata directly so v2 clients do not have to infer it from tool names
    or resource URIs.
    
    ## What changed
    
    - Add optional `appName`, `templateId`, and `actionName` fields to MCP
    tool-call `appContext`.
    - Populate `appName` and `templateId` from trusted Codex Apps metadata,
    and derive `actionName` from the trusted app resource metadata.
    - Preserve all three fields through core events, legacy protocol events,
    persisted thread history, resume redaction, and app-server v2 responses.
    - Document the public `appContext` fields in
    `codex-rs/app-server/README.md`.
    - Regenerate app-server JSON and TypeScript schemas and add coverage for
    serialization, persistence, redaction, and metadata propagation.
    
    ## Validation
    
    - `just test -p codex-app-server-protocol mcp_tool_call`
    - `just test -p codex-core
    mcp_tool_call_item_metadata_only_trusts_codex_apps_identity
    mcp_tool_call_item_includes_app_identity`
    - `just write-app-server-schema`
    
    ---------
    
    Co-authored-by: Martin Au-Yeung <280153141+martinauyeung-oai@users.noreply.github.com>
  • [codex] Attribute app-server analytics by thread originator (#29935)
    ## Why
    
    Desktop Work threads and regular Codex threads can share the same
    app-server connection. App-server analytics currently copy
    `product_client_id` from connection metadata for every thread-scoped
    event, so Work thread activity is attributed to the Desktop connection
    instead of the thread's resolved originator. This prevents analytics
    from distinguishing the two products on a shared connection.
    
    ## What changed
    
    - Publish the resolved originator after a thread is materialized,
    covering new, resumed, forked, and subagent threads.
    - Store that originator in the analytics reducer's existing per-thread
    state.
    - Override only `app_server_client.product_client_id` for thread, turn,
    tool, review, goal, guardian, and compaction events while preserving the
    connection's client name, version, and transport metadata.
    - Fall back to the connection-wide product client ID when a thread has
    no originator override.
    - Preserve persisted originators in thread initialization analytics for
    resume and fork flows.
    
    ## Validation
    
    - `just test -p codex-analytics
    thread_originator_overrides_shared_connection_across_thread_events
    subagent_events_keep_thread_originator_with_explicit_turn_connection`
    - `just test -p codex-app-server
    turn_start_tracks_thread_originator_in_analytics
    thread_start_tracks_thread_initialized_analytics
    thread_fork_tracks_thread_initialized_analytics
    thread_resume_tracks_thread_initialized_analytics`
    - `just test -p codex-core thread_manager`
  • Persist selected capability roots and resolve availability per model step (#29856)
    ## Why
    
    `selectedCapabilityRoots` is durable thread intent: “use this capability
    root from environment `worker`.”
    
    The important product assumption is:
    
    > One environment ID always names the same logical executor and stable
    contents.
    
    `worker` does not silently change from executor A to an unrelated
    executor B. The process-local connection handle for `worker` can still
    be replaced while Codex is running, though, for example when
    `environment/add` registers a fresh handle for the same logical
    environment.
    
    The thread should persist only the stable selection. Each model step
    should pair that selection with the exact ready handle captured for that
    step.
    
    ## The boundary
    
    ```text
    persisted thread intent
      plugin@1 -> environment "worker"
                    |
                    | capture the current step
                    v
    model-step view
      unavailable, or
      plugin@1 + worker's exact captured ready handle
    ```
    
    The environment ID is the stable identity and cache key. The
    `Arc<Environment>` is only a process-local handle retained so consumers
    of one model step use the same captured environment. It is never
    persisted and it does not imply different environment contents.
    
    ## What changes
    
    ### Persist the stable selection
    
    Selected roots are written into `SessionMeta` and restored with the
    thread. Forked subagents inherit the same selections, including
    bounded-history forks.
    
    Only stable data is persisted: root ID, environment ID, and root path.
    
    ### Capture readiness together with the exact handle
    
    The environment snapshot records:
    
    ```rust
    environment_id -> Some(Arc<Environment>) // ready in this step
    environment_id -> None                   // still starting in this step
    ```
    
    This prevents readiness and execution from coming from different
    registry snapshots.
    
    For example:
    
    ```text
    step snapshot: worker -> handle A, ready
    environment/add: worker -> fresh handle B for the same logical environment
    current step: plugin@1 still uses captured handle A
    ```
    
    Without carrying handle A in the snapshot, the resolver could combine “A
    was ready” with handle B and treat B as ready before it had finished
    starting.
    
    This does not change cache invalidation. Stable capability metadata
    remains identified by environment ID and capability root. Replacing a
    process-local handle under the same stable environment ID does not
    invalidate or rediscover that metadata.
    
    ### Resolve availability per model step
    
    - A ready captured environment produces resolved roots using its
    captured handle.
    - A starting, missing, or failed environment is omitted from that step.
    - A selected lazy environment that is outside the turn's captured
    environment set is asked to start, and a later step can observe it as
    ready.
    - No capability files are scanned here.
    
    Transient transport disconnects remain the remote client's reconnect
    concern. This PR models initial attachment/readiness; it does not add
    live socket-connectivity state.
    
    ## Example
    
    ```text
    thread selection: plugin@1 -> environment "worker"
    
    step 1: worker is starting -> plugin@1 unavailable
    step 2: worker is ready    -> plugin@1 resolves through worker's captured handle
    step 3: fresh local handle -> current step remains pinned; a later step captures its own view
    ```
    
    Temporary unavailability does not discard the durable selection. Later
    PRs can retain stable metadata caches while projecting only currently
    available capabilities into model-visible World State.
    
    ## Compatibility
    
    The app-server request shape does not change. Older rollouts without
    `selected_capability_roots` deserialize to an empty list.
    
    ## Stack
    
    1. **This PR:** persist stable selected roots and resolve them through
    an exact model-step handle.
    2. #29960: cache stable skill metadata and project available skills into
    World State.
    3. #29946: cache stable plugin declarations and manage the separate live
    MCP runtime.
  • test: use automatic environments in app-server integration tests (#29789)
    ## Why
    
    Topology-neutral app-server integration tests should exercise automatic
    environment selection so the same setup covers local and remote
    executors.
    
    ## What
    
    Migrate eligible tests to `TestAppServer::new_with_auto_env()` and
    `send_thread_start_request_with_auto_env()`. Leave explicit-topology
    tests unchanged, and skip the request-permissions case on Windows with a
    TODO for cross-platform tool routing.
    
    ## Validation
    
    - `just test -p codex-app-server`
    - `bazel test //codex-rs/app-server:app-server-all-wine-exec-test
    --test_output=errors`
    
    Stacked on #29788.
  • core: persist initial context window metadata (#29519)
    ## Why
    
    PR #29494 made context-window IDs visible to the model by wrapping the
    token-budget window payload in `<context_window>`, but rollout JSONL
    consumers still could not see the initial window identity by tailing the
    session file. Compacted rollout items carry window IDs only after
    compaction has happened, so a session with no compaction had no durable
    JSONL record for window 0.
    
    This change gives tailing consumers a stable initial-window record at
    session creation time.
    
    ## What Changed
    
    - Added `session_meta.context_window.window_id` for the initial
    context-window identity.
    - `CreateThreadParams` now requires `initial_window_id: String`, so
    thread-store callers cannot accidentally create new threads without
    window-0 metadata.
    - Live thread creation derives the persisted initial window ID from the
    same `AutoCompactWindowIds` used to initialize `SessionState`, keeping
    runtime state and JSONL metadata aligned.
    - Rollout reconstruction uses `session_meta.context_window.window_id` as
    the initial-window fallback and derives `window_number = 0`,
    `first_window_id = window_id`, and `previous_window_id = None`
    internally.
    - Fork reconstruction intentionally uses the same rollout reconstruction
    path; consumers that need to distinguish copied initial-window metadata
    can use the rollout `thread_id`.
    - Legacy compactions without `window_number` still use compaction-count
    fallback accounting instead of being reset to window 0 by the
    initial-window fallback.
    - Compacted rollout metadata still takes precedence once compaction
    records exist, preserving the richer chain fields there.
    
    ## JSONL Shape
    
    Real rollout JSONL is one object per line. This example is expanded for
    readability, but shows the new initial `session_meta.context_window`
    record followed by the existing compacted rollout item shape that also
    carries window IDs:
    
    ```jsonl
    {
      "timestamp": "2026-06-22T12:00:00.000Z",
      "type": "session_meta",
      "payload": {
        "session_id": "<THREAD_ID>",
        "id": "<THREAD_ID>",
        "timestamp": "2026-06-22T12:00:00.000Z",
        "cwd": "/repo",
        "originator": "codex",
        "cli_version": "0.0.0",
        "source": "cli",
        "model_provider": "<MODEL_PROVIDER>",
        "context_window": {
          "window_id": "<INITIAL_WINDOW_ID>"
        }
      }
    }
    ...
    {
      "timestamp": "2026-06-22T12:34:56.000Z",
      "type": "compacted",
      "payload": {
        "message": "<COMPACTION_SUMMARY>",
        "replacement_history": [
          "..."
        ],
        "window_number": 1,
        "first_window_id": "<INITIAL_WINDOW_ID>",
        "previous_window_id": "<INITIAL_WINDOW_ID>",
        "window_id": "<NEXT_WINDOW_ID>"
      }
    }
    ```
    
    The nested `context_window` object is intentional: it gives rollout
    consumers a stable namespace for context-window metadata while only
    writing the non-derivable initial `window_id`. For the initial window,
    `window_number`, `first_window_id`, and `previous_window_id` are derived
    internally instead of being written to the rollout.
    
    ## Verification
    
    - `just test -p codex-protocol`
    - `just test -p codex-rollout
    recorder_materializes_on_flush_with_pending_items`
    - `just test -p codex-core reconstruct_history`
    - `just test -p codex-core
    record_initial_history_reconstructs_forked_transcript`
    - `just test -p codex-thread-store`
    - `just test -p codex-state`
    - `just test -p codex-app-server
    thread_read_returns_summary_without_turns`
    - `just test -p codex-rollout persistence_metrics`
  • core: rename metadata -> internal_chat_message_metadata_passthrough (#28968)
    ## Description
    This PR cuts Codex over from generic `ResponseItem.metadata` (introduced
    here: https://github.com/openai/codex/pull/28355) to
    `ResponseItem.internal_chat_message_metadata_passthrough`, which is the
    blessed path and has strongly-typed keys.
    
    For now we have to drop this MAv2 usage of `metadata`:
    https://github.com/openai/codex/pull/28561 until we figure out where
    that should live.
  • Persist session IDs across thread resume (#29327)
    ## Summary
    
    A cold-resumed subagent kept its durable thread ID but could receive a
    new session ID, splitting one agent tree across multiple sessions after
    a restart.
    
    Persist the root session ID in every rollout `SessionMeta`, carry it
    through thread creation, and restore it before initializing the resumed
    `Session` and `AgentControl`.
    
    ## Behavior
    
    For a nested agent tree:
    
    ```text
    root session R
      parent thread P
        child thread C
    ```
    
    The child rollout stores:
    
    ```text
    session_id:       R
    parent_thread_id: P
    id:               C
    ```
    
    After a cold resume, the child still belongs to root session `R` while
    its immediate parent remains `P`. The integration coverage uses distinct
    values for all three IDs so it catches restoring the session from
    `parent_thread_id`.
    
    ## Legacy rollouts
    
    Previous rollouts have `id` but no `session_id`. `SessionMetaLine`
    deserialization treats a missing `session_id` as `id`, keeping those
    files readable, listable, and resumable. When a legacy subagent is
    resumed through its root, that synthesized child ID no longer overrides
    the inherited root-scoped `AgentControl`. New rollouts always persist
    the explicit root session ID.
  • core: load AGENTS.md from foreign environments (#28958)
    ## Why
    
    Make it possible to load AGENTS.md from remote exec-servers whose OS is
    different than app-server.
    
    ## What
    
    - keep `AGENTS.md` discovery and provenance as `PathUri`, with
    root-aware parent and ancestor traversal
    - expose lifecycle instruction sources as legacy app-server path strings
    in events while retaining `PathUri` internally
    - preserve and test mixed POSIX and Windows paths in model context and
    TUI status output
    - cover remote Windows loading end to end by seeding the Wine prefix
    through host filesystem APIs
    - fix bug in `PathUri`'s parent() implementation that would erase
    Windows drive letters
  • Emit Trusted MCP App Identity on Tool-Call Items (#27132)
    ## Summary
    
    - Add optional `appContext` to app-server MCP tool-call items with
    trusted `connectorId`, `linkId`, and `mcpAppResourceUri` metadata.
    - Preserve that context across tool-call events, persisted history,
    reconnects, and thread resume.
    - Keep the deprecated top-level `mcpAppResourceUri` temporarily for
    client migration.
    
    The consumer contract is `{ appContext: { connectorId, linkId,
    mcpAppResourceUri }, tool }`.
    
    ## Validation
    
    - Full GitHub Actions suite passes, including CLA, Bazel tests, clippy,
    release builds, and argument-comment lint.
    
    ---------
    
    Co-authored-by: martinauyeung-oai <280153141+martinauyeung-oai@users.noreply.github.com>
  • Fix goal-first live threads missing from thread/list (#28808)
    Fixes #28263.
    
    ## Why
    
    When a thread starts with `/goal`, the goal extension can update SQLite
    goal state before the thread has any user-turn rollout items.
    `thread/list` and `thread/search` rely on persisted listing metadata, so
    a goal-first live thread could be absent from app-server listings after
    restart even though the goal itself existed.
    
    This regressed when goal handling moved out of core: the core path wrote
    the goal update through the live thread rollout path, while the
    extension-backed app-server path only updated goal state and emitted the
    live notification.
    
    ## What
    
    - Add `GoalSetOutcome::thread_goal_updated_item()` so the goal extension
    owns the canonical `ThreadGoalUpdated` rollout item shape.
    - Expose a narrow `CodexThread::append_rollout_items()` helper that
    appends through the live thread and keeps derived SQLite metadata in
    sync.
    - When app-server sets a goal on an active live thread, persist the goal
    update through that live-thread path.
    - Add an app-server regression test that starts a live thread with
    `thread/goal/set` and verifies it appears in state-DB-only
    `thread/list`.
    
    ## Verification
    
    - `env -u CODEX_SQLITE_HOME just test -p codex-app-server
    goal_first_live_thread_appears_in_state_db_thread_list`
  • [codex] Restore thread recency with compatible migration history (#28671)
    ## Summary
    
    - Revert #28655, restoring the thread `recencyAt` behavior introduced by
    #27910.
    - Move `threads_recency_at` to migration 0039 so it no longer collides
    with `external_agent_config_imports` at version 0038.
    - Repair databases that already applied the recency migration as version
    38 by moving the matching migration-history row to version 39 before
    SQLx validation. The current version-38 migration can then apply
    normally.
    
    ## Validation
    
    - `just test -p codex-state
    migrations::tests::repairs_recency_migration_that_was_applied_as_version_38`
    - `just test -p codex-state -p codex-rollout -p codex-thread-store -p
    codex-app-server-protocol -p codex-tui`: 3,439 passed; six TUI tests
    could not open the machine's existing read-only incident database at
    `~/.codex/sqlite/state_5.sqlite`.
    - `just fix -p codex-state`
    - `just fmt`
    - Verified that state migration versions are unique.
  • Revert thread recencyAt for sidebar ordering (#28655)
    ## Why
    
    Revert #27910 to remove the newly introduced thread `recencyAt`
    persistence and API behavior from `main`.
    
    ## What changed
    
    This reverts commit `fac3158c2a783095768076489815f361fa9b0db4`,
    including the state migration, thread-store propagation, app-server API
    surface, generated schemas, and related tests.
    
    ## Validation
    
    Not run before opening; relying on CI for the initial fast signal.
  • Add thread recencyAt for sidebar ordering (#27910)
    ## Summary
    
    Add a server-owned `recencyAt` timestamp and `recency_at` thread-list
    sort key for product recency ordering while preserving the existing
    meaning of `updatedAt` as the latest persisted thread mutation.
    
    This is the server-side alternative to #27697. Rather than narrowing
    `updatedAt`, clients can sort the sidebar by `recency_at` and continue
    treating `updatedAt` as mutation time.
    
    Paired Codex Apps PR:
    [openai/openai#1024599](https://github.com/openai/openai/pull/1024599)
    
    ## Contract
    
    - `recencyAt` initializes when a thread is created.
    - A turn start advances `recencyAt` monotonically.
    - Commentary, agent output, tool results, token/accounting updates, turn
    completion, archive, unarchive, resume, and generic metadata writes do
    not advance it.
    - `updatedAt` retains its existing behavior and continues to advance for
    persisted thread mutations.
    - Current servers populate `recencyAt`; the response field is optional
    in generated TypeScript so clients connected to older servers can fall
    back to `updatedAt`.
    - Filesystem-only fallback uses existing updated/mtime ordering when
    SQLite is unavailable.
    
    ## Persistence and compatibility
    
    Migration 0038 adds second- and millisecond-precision recency columns,
    backfills them from the existing updated timestamp, creates list
    indexes, and includes an insert trigger so older binaries writing to a
    migrated database seed recency without causing later mutations to
    advance it.
    
    Generic metadata upserts preserve existing recency values. Turn-start
    updates use a dedicated monotonic touch, and process-local allocation
    keeps millisecond cursor values unique. State DB list, search, read,
    filtered-list repair, rollout fallback propagation, and app-server
    conversions all carry the new field.
    
    ## API
    
    `Thread` responses include:
    
    ```ts
    recencyAt?: number
    ```
    
    `thread/list` and `thread/search` accept:
    
    ```json
    { "sortKey": "recency_at" }
    ```
    
    Generated TypeScript and JSON schemas are included.
    
    ## Validation
    
    - `just test -p codex-state` — 146 passed
    - `just test -p codex-rollout` — 69 passed
    - `just test -p codex-thread-store` — 81 passed
    - `just test -p codex-app-server-protocol` — 231 passed
    - Focused app-server list ordering, response mapping, archive/unarchive,
    and resume lifecycle tests passed
    - Scoped `just fix` for state, rollout, thread-store,
    app-server-protocol, and app-server
    - `just fmt`
    - `git diff --check`
    - Independent correctness, simplicity, elegance, security, and
    test-quality reviews; actionable ordering, lifecycle, query-projection,
    and timestamp-uniqueness findings were addressed
  • feat(core): add metadata field to ResponseItem (#28355)
    ## Description
    
    This PR adds an optional `metadata` field to `ResponseItem` for
    Responses API calls. Only mechanical plumbing, no actual values
    populated and sent yet. Turns out just adding a new field to
    `ResponseItem` has quite a large blast radius already.
    
    This change is backwards compatible because `metadata` is optional and
    omitted when absent, so existing response items and rollout history
    without it still deserialize and requests that do not set it keep the
    same wire shape. For provider compatibility, we strip out `metadata`
    before non-OpenAI Responses requests so Azure and AWS Bedrock never see
    this field.
    
    My followup PR here will actually make use of it to start storing and
    passing along `turn_id`: https://github.com/openai/codex/pull/28360
    
    ## What changed
    
    - Added `ResponseItemMetadata` with optional `turn_id`, plus optional
    `metadata` on Responses API item variants and inter-agent communication.
    - Preserved item metadata through response-item rewrites such as
    truncation, missing tool-output synthesis, compaction history
    rebuilding, visible-history conversion, rollout/resume, and generated
    app-server schemas/types.
    - Strip item metadata from non-OpenAI Responses requests while
    preserving it for OpenAI-shaped requests.
    - Updated the mechanical fixture/test construction churn required by the
    new optional field.
  • [codex-analytics] emit goal lifecycle analytics (#27078)
    ## Why
    - Currently, there is no analytics event for `/goal` behavior
    - Existing events cannot identify goal execution or its resulting
    outcome
    - The original update in
    [#26182](https://github.com/openai/codex/pull/26182) was implemented
    before `/goal` moved into `codex-goal-extension`.
    
    ## What Changed
    - Adds `codex_goal_event` serialization and enrichment to
    `codex-analytics`
    - Emits goal events from the canonical `codex-goal-extension` mutation
    and accounting paths:
      - `created` when a new logical goal is persisted
      - `usage_accounted` when cumulative goal usage is persisted
      - `status_changed` when the stored goal status changes
      - `cleared` when the goal is deleted
    - Preserves causal `turn_id` for turn driven events and uses null
    attribution for external or idle lifecycle events
    - Changes goal deletion to return the deleted row so `cleared` retains
    the stable goal ID
    
    ## Event Details
    
    Includes standard analytics metadata along with goal specific fields:
    - `goal_id`: Stable ID stored in the local SQLite goal row and shared
    across the goal's events
    - `event_kind`: Observed operation (see the 4 lifecycle events cited in
    the above bullet)
    - `goal_status`: Resulting or last stored status: `active`, `paused`,
    `blocked`, `usage_limited`, etc.
      - `has_token_budget`: Indicates whether a token budget is configured
      - `turn_id`: Causal turn ID, or null when no causal turn exists
    - `cumulative_tokens_accounted`: Cumulative tokens on `usage_accounted`
    events; null otherwise
    - `cumulative_time_accounted_seconds`: Cumulative active time on
    `usage_accounted` events; null otherwise
    
    ## Validation
    - `just test -p codex-analytics -p codex-state -p codex-goal-extension`
    - `just test -p codex-core -E 'test(/goal/)'`
    - `just test -p codex-app-server`
    - `cargo build -p codex-analytics -p codex-core -p codex-state -p
    codex-app-server`
  • Make runtime workspace roots absolute in app-server API (#26552)
    Stacked on #26532.
    
    ## Why
    
    #26532 moves cwd normalization to the app-server/core boundary.
    `runtimeWorkspaceRoots` still accepted raw paths in v2 requests and in
    `ConfigOverrides`, which left core responsible for interpreting those
    roots later. This makes runtime workspace roots follow the same
    absolute-path boundary as cwd.
    
    ## What
    
    - Change v2 `runtimeWorkspaceRoots` request fields for `thread/start`,
    `thread/resume`, `thread/fork`, and `turn/start` to `AbsolutePathBuf`.
    - Deduplicate already-absolute runtime roots in app-server handlers and
    pass them through `ConfigOverrides.workspace_roots` as
    `AbsolutePathBuf`.
    - Update TUI and exec client request builders to pass absolute runtime
    roots directly.
    - Update app-server docs, schema fixtures, and focused tests for
    absolute runtime roots.
    
    ## Testing
    
    - `just test -p codex-app-server-protocol`
    - `just test -p codex-app-server runtime_workspace_roots`
    - `just test -p codex-core
    session_permission_profile_rebinds_runtime_workspace_roots`
    - `just test -p codex-tui app_server_session`
    - `just test -p codex-exec`
  • [codex] Preserve logical paths during AGENTS.md discovery (#26465)
    ## Intent
    
    Follow up on #26205 by avoiding unnecessary filesystem canonicalization
    during `AGENTS.md` discovery. The configured working directory is
    already absolute, and canonicalization incorrectly switches symlinked
    workspaces from their logical parent hierarchy to the target's
    hierarchy.
    
    ## User-facing behavior
    
    For a symlinked working directory such as:
    
    ```text
    test-root/
    |-- logical-repo/
    |   |-- AGENTS.md              ("logical parent doc")
    |   `-- workspace ------------> physical-repo/workspace/
    `-- physical-repo/
        |-- AGENTS.md              ("physical parent doc")
        `-- workspace/
            `-- AGENTS.md          ("workspace doc")
    ```
    
    Before this change, Codex canonicalized `logical-repo/workspace` to
    `physical-repo/workspace` before discovery. It therefore loaded
    `physical-repo/AGENTS.md` and `physical-repo/workspace/AGENTS.md`,
    ignoring the instructions from the repository through which the user
    entered the workspace.
    
    After this change, ancestor discovery walks the configured logical path,
    so Codex loads `logical-repo/AGENTS.md`. Opening
    `logical-repo/workspace/AGENTS.md` still follows the symlink through the
    host filesystem, so the workspace document is also loaded.
    `physical-repo/AGENTS.md` is not loaded.
    
    ## Implementation
    
    Use the logical absolute working directory when discovering project
    instructions and reporting instruction sources. Filesystem reads still
    follow the working-directory symlink, so an `AGENTS.md` in the target
    workspace continues to load while ancestor discovery uses the symlink's
    parents.
    
    ## Validation
    
    Added integration coverage proving that discovery loads the logical
    parent's instructions and the target workspace's instructions, but not
    the target parent's instructions.
  • Route AGENTS.md loading through environment filesystems (#26205)
    ## Why
    
    Workspace-specific `AGENTS.md` loading needs to use the selected
    environment filesystem so remote workspaces and child agents read
    instructions from their actual environment instead of the host
    filesystem. The app-server should report the same instruction sources
    the initialized thread actually loaded, rather than independently
    rescanning configuration and filesystem state.
    
    ## What changed
    
    - Introduce `LoadedAgentsMd` to retain ordered user, project, and
    internal instructions with their provenance.
    - Load and canonicalize workspace `AGENTS.md` paths through the primary
    `EnvironmentManager` environment, then render the loaded instructions
    when constructing turn context.
    - Expose cached loaded instruction sources from initialized threads and
    use them for app-server start, resume, and fork responses.
    - Preserve global `CODEX_HOME` loading and separator behavior while
    excluding empty project files that did not supply model-visible
    instructions.
    - Add integration coverage for CLI injection, selected-environment
    provenance and rendering, empty environment selection, and cached
    sources on loaded-thread resume.
    
    ## Validation
    
    - `just test -p codex-core agents_md`
    - `just test -p codex-core
    selected_environment_sources_match_model_visible_instructions`
    - `just test -p codex-exec agents_md`
    - `just test -p codex-app-server instruction_sources`
    - `just test -p codex-app-server --status-level fail`
  • Switch runtime to cloud config bundle (#24622)
    ## Summary
    
    - Adapts the moved `codex-cloud-config` crate from the legacy cloud
    requirements endpoint to the new config bundle endpoint.
    - Switches runtime consumers from `CloudRequirementsLoader` to
    `CloudConfigBundleLoader` so one shared bundle supplies cloud-delivered
    config and requirements.
    - Removes the legacy cloud requirements domain loader path.
    
    ## Details
    
    This intentionally keeps `codex-cloud-config` monolithic for review
    lineage: the previous PR establishes the crate move, and this PR shows
    the behavior change against that moved implementation. A follow-up PR
    splits the module back into focused files.
    
    The new bundle path preserves the important cloud requirements loader
    semantics where intended: account-scoped signed cache, 30 minute TTL, 5
    minute refresh cadence, retry/backoff, auth recovery, and fail-closed
    startup loading. The cached payload changes from a single requirements
    TOML string to the backend-delivered bundle, and validation rejects
    malformed config or requirements fragments before cache write/use.
  • Fix Windows running thread resume path normalization (#25509)
    ## Why
    
    Fixes #24944.
    
    On Windows, app-server resume could reject an active running thread when
    the requested session path used normal `C:\...` form and the
    already-running path used verbatim `\\?\C:\...` form. The paths point at
    the same JSONL file, but the resume stale-path guard compared raw
    `PathBuf`s, so desktop resume and heartbeat flows could fail with a
    mismatched-path error.
    
    ## What Changed
    
    - Compare requested and active rollout paths with
    `path_utils::paths_match_after_normalization`.
    - Extend the existing running-thread mismatched-path test with a
    Windows-only same-file resume case before the stale-path rejection.
    
    ## Verification
    
    - `just test -p codex-app-server
    thread_resume_rejects_mismatched_path_for_running_thread_id`
  • Add multi-agent runtime metadata types (#25720)
    Stack split from #25708. Original PR intentionally left open. This first
    PR adds the multi-agent runtime metadata types and catalog plumbing used
    by the rest of the stack.
  • fix: rename McpServer to TestAppServer (#25701)
    This PR brought to you via VS Code rather than Codex...
    
    - opened `codex-rs/app-server/tests/common/mcp_process.rs`
    - put the cursor on `McpServer`
    - hit `F2` and renamed the symbol to `TestAppServer`
    - went to the file tree
    - hit enter and renamed `mcp_process.rs` to `test_app_server.rs`
    - ran **Save All Files** from the Command Palette
    - ran `just fmt`
    
    The End
    
    (Admittedly, most of the local variables for `TestAppServer` are still
    named `mcp`, though.)
  • store and expose parent_thread_id on Threads (#25113)
    ## Why
    
    This PR
    https://github.com/openai/codex/pull/24161#discussion_r3325692763
    revealed a subagent data modeling issue, where we overloaded
    `forked_from_id` to also mean `parent_thread_id`. That's incorrect since
    guardian and review subagents can be a subagent and NOT fork the main
    thread's history.
    
    The solution here is to explicitly store a new `parent_thread_id` on
    `SessionMeta`, alongside `forked_from_id` which already exists. While
    we're at it, also expose it in the app-server protocol on the `Thread`
    object.
    
    A thread->subagent relationship and a fork of thread history are
    orthogonal concepts.
    
    ## What Changed
    
    - Added top-level `parent_thread_id` persistence on `SessionMeta` and
    runtime/session plumbing through `SessionConfiguredEvent`,
    `CodexSpawnArgs`, `SessionConfiguration`, `ThreadConfigSnapshot`,
    `TurnContext`, and `ModelClient`.
    - Made turn metadata, request headers, analytics, and subagent-start
    events read the separate runtime/top-level parent field instead of
    deriving general parent lineage from `SessionSource` or
    `forked_from_thread_id`.
    - Passed parent lineage separately at delegated subagent, review,
    guardian, agent-job, and multi-agent spawn construction sites;
    copied-history fork lineage remains derived only from `InitialHistory`.
    - Persisted and exposed parent lineage through rollout/thread-store
    projections and app-server v2 `Thread.parentThreadId`.
    - Updated app-server README text and regenerated app-server schema
    fixtures for the additive `parentThreadId` response field.
  • Add thread archive CLI commands (#25021)
    ## Problem
    
    Saved threads can already be archived through app-server RPCs, but the
    command line did not expose direct archive or unarchive commands.
    
    ## Solution
    
    Add `codex archive <thread>` and `codex unarchive <thread>`, resolving
    UUIDs or exact thread names before calling the existing `thread/archive`
    and `thread/unarchive` RPCs. The commands support scoped remote flags so
    callers can target remote app-server endpoints when archiving or
    unarchiving threads.
    
    This also fixes a long-standing bug in `codex resume <thread id>` and
    `codex fork <thread id>` that I found when testing the new commands.
    These operations shouldn't be allowed on archived sessions. They now
    fail with an error that tells the user to run `codex unarchive <thread
    id>` first.
    
    ## Verification
    
    Added app-server coverage for rejecting archived thread resume by id and
    checking that the error includes the matching `codex unarchive <thread
    id>` command.
  • [codex] Add user input client ids (#24653)
    ## Summary
    
    Adds an optional `clientId` field to app-server v2 `UserInput` and
    carries it through the core `UserInput` model so clients can correlate
    echoed user input items without relying on payload equality.
    
    ## Details
    
    - Adds `client_id: Option<String>` to core `UserInput` variants.
    - Exposes the v2 app-server field as `clientId` on the wire and in
    generated TypeScript.
    - Preserves the id when converting between app-server v2 and core
    protocol types.
    - Regenerates app-server schema fixtures.
    
    ## Validation
    
    - `just fmt`
    - `just write-app-server-schema`
    - `cargo test -p codex-app-server-protocol`
    - `cargo test -p codex-protocol`
    - `just fix -p codex-app-server-protocol`
    - `just fix -p codex-protocol`
    - `git diff --check`
  • feat(app-server): include turns page on thread resume (#23534)
    ## Summary
    
    The client currently calls `thread/resume` to establish live updates and
    immediately follows it with `thread/turns/list` to hydrate recent turns.
    This lets `thread/resume` return that page directly, eliminating a round
    trip and the ordering/deduplication gap between the two calls.
    
    Experimental clients opt in with `initialTurnsPage: { limit,
    sortDirection, itemsView }`. The response returns `initialTurnsPage` as
    a `TurnsPage`, including cursors for paging further back in history.
    Keeping the controls in a nested opt-in object provides the useful
    `thread/turns/list` knobs without spreading page-specific parameters
    across `thread/resume`.
    
    ## Verification
    
    - `just fmt`
    - `just write-app-server-schema --experimental`
    - `just write-app-server-schema`
    - `cargo test -p codex-app-server-protocol`
    - `cargo test -p codex-app-server
    thread_resume_initial_turns_page_matches_requested_turns_list_page
    --tests`
    - `cargo test -p codex-app-server
    thread_resume_rejoins_running_thread_even_with_override_mismatch
    --tests`
    - `just fix -p codex-app-server-protocol -p codex-app-server`
  • [codex-analytics] add grouped session id to runtime events (#24655)
    ## Why
    - Runtime analytics events report `thread_id`, which identifies the
    individual thread emitting an event
    - They don't report `session_id`, which identifies the shared session
    for a root thread and its subagent threads
    - Emitting both identifiers allows analytics to group related activity
    
    ## What Changed
    - Adds `session_id` to relevant analytics events (thread_initalized,
    turn, turn_steer, compaction, guardian_review)
    - Tracks each thread's session ID in the analytics reducer so subsequent
    thread scoped events emit the same value
    - Carries the shared session ID through subagent initialization
    
    ## Verification
    - `just test -p codex-analytics` validates event payloads and subagent
    session grouping.
    - Focused `codex-app-server` tests validate session IDs for thread,
    turn, and steer events.
    - Focused `codex-core` tests validate root and subagent session ID
    propagation.
  • Respect resume cwd overrides for idle cached threads (#24528)
    Fixes #24186.
    
    ## Why
    When the TUI resumes a thread through the local app-server daemon with a
    selected workspace, `thread/resume` can hit an already-loaded but idle
    cached thread. That path previously rejoined the cached `CodexThread`,
    so cwd/config overrides in `ThreadResumeParams` were ignored and the
    resumed session kept using the old cwd.
    
    ## What changed
    App-server now treats a loaded-but-idle thread with no subscribers as a
    cache entry when resume overrides differ: it unloads that cached thread
    and lets the normal resume path rebuild it with the requested
    cwd/config. Threads that still have subscribers, or active runtime work,
    continue to rejoin the existing loaded thread so in-flight state remains
    observable.
    
    The existing thread teardown helper was generalized from
    archive-specific cleanup to shared unload cleanup for this path.
  • Add trace_id to TurnStartedEvent (#23980)
    ## Why
    [Recent PR](https://github.com/openai/codex/pull/22709) removed
    `trace_id` from `TurnContextItem`.
    
    ## What changed
    - Add to `TurnStartedEvent` so rollout consumers can correlate turns
    with telemetry traces.
    - Note that the branch name is out of date because I originally re-added
    to `TurnContextItem`, but we decided to move it to `TurnStartedEvent`.
    
    ## Verification
    - `cargo test -p codex-protocol`
    - `cargo test -p codex-core --lib
    regular_turn_emits_turn_started_without_waiting_for_startup_prewarm`
    - `cargo test -p codex-core --test all
    emits_warning_when_resumed_model_differs`
    - `cargo test -p codex-rollout`
    - `cargo test -p codex-state`
  • [codex] Add plugin id to MCP tool call items (#23737)
    Add owning plugin id to MCP tool call items so we can better filter them
    at plugin level.
    
    ## Summary
    - add optional `plugin_id` to MCP tool-call items and legacy begin/end
    events
    - propagate plugin metadata into emitted core items and app-server v2
    `ThreadItem::McpToolCall`
    - preserve plugin ids through app-server replay/redaction paths and
    regenerate v2 schema fixtures
    
    ## Testing
    - `just write-app-server-schema`
    - `just fmt`
    - `just fix -p codex-core`
    - `cargo test -p codex-protocol -p codex-app-server-protocol`
    - `cargo test -p codex-app-server-protocol`
    - `cargo test -p codex-core mcp_tool_call_item_includes_plugin_id --lib`
    - `cargo check -p codex-tui --tests`
    - `cargo check -p codex-app-server --tests`
    - `git diff --check`
    
    ## Notes
    - `just fix -p codex-core` completed with two non-fatal
    `too_many_arguments` warnings on the touched MCP notification helpers.
    - A broader `cargo test -p codex-core` run passed core unit tests, then
    hit shell/sandbox/snapshot failures in the integration target.
    - A broader app-server downstream run hit the existing
    `in_process::tests::in_process_start_clamps_zero_channel_capacity` stack
    overflow; `cargo test -p codex-exec` also hit the existing sandbox
    expectation mismatch in
    `thread_lifecycle_params_include_legacy_sandbox_when_no_active_profile`.
  • feat: rename 1 (#23667)
    Just a mechanical renaming
  • Fix empty rollout path app-server handling (#23400)
    ## Summary
    - Coerce `path: ""` to `None` at the v2 protocol params deserialization
    boundary for `thread/resume` and `thread/fork`.
    - Restore the pre-ThreadStore running-thread resume behavior: if
    `threadId` is already running, rejoin it by id and treat a non-empty
    `path` only as a consistency check; otherwise cold resume keeps `history
    > path > threadId` precedence.
    - Add protocol, resume, and fork regression coverage for empty path
    payloads; refresh app-server schema fixtures for the clarified params
    docs.
    
    ## Tests
    - `just fmt`
    - `just write-app-server-schema`
    - `cargo test -p codex-app-server-protocol
    thread_path_params_deserialize_empty_path_as_none`
    - `cargo test -p codex-app-server-protocol --test schema_fixtures`
    - `cargo test -p codex-app-server empty_path`
    - `RUST_MIN_STACK=8388608 cargo test -p codex-app-server --test all
    thread_resume_rejects_mismatched_path_for_running_thread_id`
    - `RUST_MIN_STACK=8388608 cargo test -p codex-app-server --test all
    thread_resume_uses_path_over_non_running_thread_id`
  • feat: dedicated goal DB (#23300)
    ## Why
    
    Thread goals are moving toward extension-owned runtime behavior, but
    their persisted state was still stored in the shared state database.
    This makes the goal store harder to isolate and keeps future storage
    splits tied to ad hoc runtime plumbing.
    
    This PR gives goals their own SQLite database while keeping the existing
    `StateRuntime` entry point. The goal is to make this the pattern for
    adding more dedicated runtime databases later.
    
    This also reduce load on existing DB and reduce contention
    
    ## Limitation
    Thread preview from goal is not supported anymore. I'm looking into this
    [EDIT]: solved
    
    ## What changed
    
    - Added a dedicated `goals_1.sqlite` database with its own
    `goals_migrations` directory.
    - Moved `thread_goals` creation into the goals DB migration set.
    - Dropped the old `thread_goals` table from the main state DB with a
    normal state migration. There is intentionally no backfill for existing
    goal rows.
    - Changed `GoalStore` to be backed only by the goals DB pool.
    - Removed the old goal-write side effect that filled empty
    `threads.preview` values from the goal objective.
    - Added shared runtime DB path metadata so startup, telemetry, `codex
    doctor`, and repair handling can include future DBs without bespoke path
    lists.
    - Updated Bazel compile data so the new goals migration directory is
    available to `sqlx::migrate!`.
    
    ## Verification
    
    - `cargo check --tests -p codex-state -p codex-cli -p codex-core -p
    codex-app-server`
    - `just fix -p codex-state`
    - `just fix -p codex-cli`
    - `just fix -p codex-app-server`
  • goal: pause continuation loops on usage limits and blockers (#23094)
    Addresses #22833, #22245, #23067
    
    ## Why
    `/goal` can keep synthesizing turns even when the next turn cannot make
    meaningful progress. Hard usage exhaustion can replay failing turns, and
    repeated permission or external-resource blockers can keep burning
    tokens while waiting for user or system intervention.
    
    ## What changed
    - Add resumable `blocked` and `usageLimited` goal states. As with
    `paused`, goal continuation stops with these states.
    - Move to `usageLimited` after usage-limit failures.
    - Allow the built-in `update_goal` tool to set `blocked` only under
    explicit repeated-impasse guidance. Updated goal continuation prompt to
    specify that agent should use `blocked` only when it has made at least
    three attempts to get past an impasse.
    
    Most of the files touched by this PR are because of the small app server
    protocol update.
    
    ## Validation
    
    I manually reproduced a number of situations where an agent can run into
    a true impasse and verified that it properly enters `blocked` state. I
    then resumed and verified that it once again entered `blocked` state
    several turns later if the impasse still exists.
    
    I also manually reproduced the usage-limit condition by creating a
    simulated responses API endpoint that returns 429 errors with the
    appropriate error message. Verified that the goal runtime properly moves
    the goal into `usageLimited` state and TUI UI updates appropriately.
    Verified that `/goal resume` resumes (and immediately goes back into
    `ussageLImited` state if appropriate).
    
    
    ## Follow-up PRs
    
    Small changes will be needed to the GUI clients to properly handle the
    two new states.
  • chore: isolate thread goal storage behind GoalStore (#23295)
    ## Why
    
    Thread goal persistence is being prepared for a dedicated storage
    boundary. Before that split, goal-specific reads, writes, accounting,
    and cleanup were exposed directly on `StateRuntime`, so core and
    app-server callsites stayed coupled to the full runtime instead of a
    goal-specific store.
    
    This PR introduces that boundary without changing the goal wire API or
    current persistence behavior. Callers now go through
    `StateRuntime::thread_goals()` and the new `GoalStore`, while
    `GoalStore` still uses the existing state DB pool underneath.
    
    ## What changed
    
    - Added `GoalStore` in `state/src/runtime/goals.rs` and exposed it from
    `StateRuntime` via `thread_goals()`.
    - Moved thread-goal reads, writes, status updates, pause, delete, and
    usage accounting onto `GoalStore`.
    - Updated core session goal handling, app-server goal RPCs, resume
    snapshots, and goal tests to use the store boundary.
    - Kept thread deletion responsible for cascading goal cleanup by
    deleting the goal through the store only after a thread row is removed.
    
    ## Testing
    
    - Existing goal persistence, resume, and accounting tests were updated
    to exercise the new `GoalStore` access path.
  • app-server: use permission ids and runtime workspace roots (#22611)
    ## Why
    
    This PR builds on [#22610](https://github.com/openai/codex/pull/22610)
    and is the app-server side of the migration from mutable per-turn
    `SandboxPolicy` replacement toward selecting immutable permission
    profiles by id plus mutable runtime workspace roots.
    
    Once permission profiles can carry their own immutable
    `workspace_roots`, app-server no longer needs to mutate the selected
    `PermissionProfile` just to represent thread-specific filesystem
    context. The mutable part now lives on the thread as explicit
    `runtimeWorkspaceRoots`, while `:workspace_roots` remains symbolic until
    the sandbox is realized for a turn.
    
    ## What Changed
    
    - Replaced the v2 permission-selection wrapper surface with plain
    profile ids for `thread/start`, `thread/resume`, `thread/fork`, and
    `turn/start`.
    - Removed the API surface for profile modifications
    (`PermissionProfileSelectionParams`,
    `PermissionProfileModificationParams`,
    `ActivePermissionProfileModification`).
    - Added experimental `runtimeWorkspaceRoots` fields to the thread
    lifecycle and turn-start APIs.
    - Threaded runtime workspace roots through core session/thread
    snapshots, turn overrides, app-server request handling, and command
    execution permission resolution.
    - Kept session permission state symbolic so later runtime root updates
    and cwd-only implicit-root retargeting rebind `:workspace_roots`
    correctly.
    - Updated the embedded clients just enough to send and restore the new
    thread state.
    - Refreshed the generated schema/TypeScript artifacts and the app-server
    README to match the new contract.
    
    ## Verification
    
    Targeted coverage for this layer lives in:
    
    - `codex-rs/app-server-protocol/src/protocol/v2/tests.rs`
    - `codex-rs/app-server/tests/suite/v2/thread_start.rs`
    - `codex-rs/app-server/tests/suite/v2/thread_resume.rs`
    - `codex-rs/app-server/tests/suite/v2/turn_start.rs`
    - `codex-rs/core/src/session/tests.rs`
    
    The key regression checks exercise that:
    
    - `runtimeWorkspaceRoots` resolve against the effective cwd on thread
    start.
    - Profile-declared workspace roots are excluded from the runtime
    workspace roots returned by app-server.
    - A turn-level runtime workspace-root update persists onto the thread
    and is returned by `thread/resume`.
    - A named permission profile selected on one turn remains symbolic so a
    later runtime-root-only turn update changes the actual sandbox writes.
    - A cwd-only turn update retargets the implicit runtime cwd root while
    preserving additional runtime roots.
    - The protocol fixtures and generated client artifacts stay in sync with
    the string-based permission selection contract.
    
    
    
    
    
    
    
    
    
    
    
    ---
    [//]: # (BEGIN SAPLING FOOTER)
    Stack created with [Sapling](https://sapling-scm.com). Best reviewed
    with [ReviewStack](https://reviewstack.dev/openai/codex/pull/22611).
    * #22612
    * __->__ #22611
  • fix(app-server): thread history redaction for remote clients (#22178)
    ## Summary
    
    Remote clients can still receive large `thread/resume` histories when
    prior turns include MCP tool call payloads or image-generation results.
    This adds a temporary response-only redaction path for the known remote
    client names.
    
    Longer term we will move towards fully paginated APIs backed by SQLite.
    
    ## Changes
    
    - Redact MCP tool call payload-bearing fields in `thread/resume`
    responses for `codex_chatgpt_android_remote` and
    `codex_chatgpt_ios_remote`.
    - Drop `imageGeneration` items from those `thread/resume` responses.
    - Keep redaction out of persisted rollout files, `thread/read`,
    `thread/turns/list`, live notifications, and token usage replay.
    - Cover the behavior with app-server helper tests and a v2 resume
    integration test that checks both remote clients plus a non-target
    control client.
    
    ## Testing
    
    - `cargo test -p codex-app-server thread_resume_redaction`
    - `cargo test -p codex-app-server
    thread_resume_redacts_payloads_for_chatgpt_remote_clients`
  • Fix goal update and add /goal edit command in TUI (#21954)
    ## Why
    
    Users have requested the ability to edit a goal's objective after a goal
    has been created. This PR exposes a new `/goal edit` command in the TUI
    to address this request.
    
    In the process of implementing this, I also noticed an existing bug in
    the goal runtime. When a goal's objective is updated through the
    `thread/goal/set` app server API, the goal runtime didn't emit a new
    steering prompt to tell the agent about the new objective. This PR also
    fixes this hole.
    
    ## What Changed
    
    - Adds `/goal edit` in the TUI, opening an edit box prefilled with the
    current goal objective.
    - Keeps active and paused goals in their current state, resets completed
    goals to active, keeps budget-limited goals budget-limited, and
    preserves the existing token budget.
    - Changes the existing `thread/goal/set` behavior so editing an
    objective preserves goal accounting instead of resetting it. The older
    reset-on-new-objective behavior was left over from before
    `thread/goal/clear`; clients that need to reset accounting can now clear
    the existing goal and create a new one.
    - Reuses the existing goal set API path; this does not add or change
    app-server protocol surface area.
    - Adds a dedicated goal runtime steering prompt when an externally
    persisted goal mutation changes the objective, so active turns receive
    the updated objective.
    
    ## Validation
    
    - Make sure `/goal edit` returns an error if no goal currently exists
    - Make sure `/goal edit` displays an edit box that can be optionally
    canceled with no side effects
    - Make sure that an edited goal results in a steer so the agent starts
    pursuing the new objective
    - Make sure the new objective is reflected in the goal if you use
    `/goal` to display the goal summary
    - Make sure that `/goal edit` doesn't reset the token budget, time/token
    accounting on the updated goal
  • [codex] Remove remote thread store implementation (#21596)
    Remove the remote thread-store backend and checked-in protobuf
    artifacts. We've moved these into another crate that link against this
    one.
    
    Also remove the config settings for thread store backend selection,
    since we'll instead pass an instantiated thread store into the core-api
    crate's main entrypoint.
  • feat(app-server): move v2 sessionId onto Thread (#21336)
    ## Why
    
    `session_id` and `thread_id` are separate identities after #20437, but
    app-server only surfaced `sessionId` on the `thread/start`,
    `thread/resume`, and `thread/fork` response envelopes. Other
    thread-bearing surfaces such as `thread/list`, `thread/read`,
    `thread/started`, `thread/rollback`, `thread/metadata/update`, and
    `thread/unarchive` either lacked the grouping key or forced clients to
    special-case those three responses.
    
    Making `sessionId` part of the reusable `Thread` payload gives every v2
    API surface one place to expose session-tree identity.
    
    ## Mental model
      1. thread.sessionId lives on `Thread`
    2. It is a view/runtime identity for the current live session tree, not
    durable stored lineage metadata
    3. When app-server has a live loaded thread, it copies the real value
    from core’s session_configured.session_id
    4. When it only has stored/unloaded data, it falls back to
    thread.sessionId = thread.id
    
    ## What changed
    
    - Added `sessionId` to the v2
    [`Thread`](https://github.com/openai/codex/blob/8fc9e9b4cf81b6f61d432e71f1eb266f6f104b63/codex-rs/app-server-protocol/src/protocol/v2/thread_data.rs#L105-L109).
    - Removed the duplicate top-level `sessionId` fields from
    `thread/start`, `thread/resume`, and `thread/fork`; clients should now
    read `response.thread.sessionId`.
    - Populated `thread.sessionId` when building live thread responses,
    replaying loaded threads, and returning stored-thread summaries so the
    field is present across start, resume, fork, list, read, rollback,
    metadata-update, unarchive, and `thread/started` paths. See
    [`load_thread_from_resume_source_or_send_internal`](https://github.com/openai/codex/blob/8fc9e9b4cf81b6f61d432e71f1eb266f6f104b63/codex-rs/app-server/src/request_processors/thread_processor.rs#L2824-L2918)
    and
    [`thread_from_stored_thread`](https://github.com/openai/codex/blob/8fc9e9b4cf81b6f61d432e71f1eb266f6f104b63/codex-rs/app-server/src/request_processors/thread_processor.rs#L3671-L3719).
    - Preserved the stored-thread fallback: if a thread has not been loaded
    into a live session tree yet, `thread.sessionId` falls back to
    `thread.id`; once the thread is live again, the field reports the active
    session tree root.
    - Regenerated the JSON/TypeScript schemas and updated the app-server
    README examples to show
    [`thread.sessionId`](https://github.com/openai/codex/blob/8fc9e9b4cf81b6f61d432e71f1eb266f6f104b63/codex-rs/app-server/README.md#L306-L310)
    on the thread object.
  • feat: add session_id (#20437)
    ## Summary
    
    Related to
    https://openai.slack.com/archives/C095U48JNL9/p1777537279707449
    TLDR:
    We update the meaning of session ids and thread ids:
    * thread_id stays as now
    * session_id become a shared id between every thread under a /root
    thread (i.e. every sub-agent share the same session id)
    
    This PR introduces an explicit `SessionId` and threads it through the
    protocol/client boundary so `session_id` and `thread_id` can diverge
    when they need to, while preserving compatibility for older serialized
    `session_configured` events.
    
    ---------
    
    Co-authored-by: Codex <noreply@openai.com>
  • [codex-analytics] rework thread_source for thread analytics (#20949)
    ## Summary
    - make `thread_source` an explicit optional thread-level field on
    `thread/start`, `thread/fork`, and returned thread payloads
    - persist `thread_source` in rollout/session metadata so resumed live
    threads retain the original value
    - replace the old best-effort `session_source` -> `thread_source`
    mapping with an explicit caller-supplied analytics classification
    
    ## Why
    Before this change, analytics `thread_source` was populated by a
    best-effort mapping from `session_source`. `session_source` describes
    the runtime/client surface, not the actual thread-level origin, so that
    projection was not accurate enough to distinguish cases such as `user`,
    `subagent`, `memory_consolidation`, and future thread origins reliably.
    
    Making `thread_source` explicit keeps one thread-level analytics field
    while letting callers provide the real classification directly instead
    of recovering it indirectly from `session_source`.
    
    ## Impact
    For new analytics events, `thread_source` now reflects the explicit
    thread-level classification supplied by the caller rather than an
    inferred value derived from `session_source`. Existing protocol fields
    remain optional; callers that omit `threadSource` now produce `null`
    instead of a best-effort inferred value.
    
    ## Validation
    - `just write-app-server-schema`
    - `cargo test -p codex-analytics -p codex-core -p
    codex-app-server-protocol --no-run`
    - `cargo test -p codex-app-server-protocol
    generated_ts_optional_nullable_fields_only_in_params`
    - `cargo test -p codex-analytics
    thread_initialized_event_serializes_expected_shape`
    - `cargo test -p codex-core
    resume_stopped_thread_from_rollout_preserves_thread_source`
  • add turn items view to app-server turns (#21063)
    ## Why
    
    `Turn.items` currently overloads an empty array to mean either that no
    items exist or that the server intentionally did not load them for this
    response. That ambiguity blocks future lazy-loading work where clients
    need to distinguish unloaded, summary, and fully hydrated turn payloads.
    
    ## What changed
    
    - add a new `TurnItemsView` enum with `notLoaded`, `summary`, and `full`
    variants
    - add required `itemsView` metadata to app-server `Turn` payloads
    - mark reconstructed persisted history as `full` and live shell-style
    turn payloads as `notLoaded`
    - keep current `thread/turns/list` behavior unchanged and document that
    it still returns `full` turns today
    - regenerate the JSON and TypeScript protocol fixtures
    
    ## Verification
    
    - `just write-app-server-schema`
    - `cargo test -p codex-app-server-protocol`
    - `cargo test -p codex-app-server thread_read_can_include_turns`
    - `cargo test -p codex-app-server
    thread_turns_list_can_page_backward_and_forward`
    - `cargo test -p codex-app-server
    thread_resume_rejects_history_when_thread_is_running`
    - `just fix -p codex-app-server-protocol`
    - `just fix -p codex-app-server`
    - `just fmt`
  • Keep paused goals paused on thread resume (#20790)
    ## Summary
    
    Early adopters of the `/goal` feature have provided feedback that they
    expect a goal they explicitly paused to remain paused when they resume a
    thread. Previously, resuming a thread would reactivate a paused goal.
    
    This PR keeps persisted goal status unchanged during thread resume. This
    honors the user feedback while also simplifying the core goal logic.
    
    Rather than have the core logic automatically resume a paused goal, that
    responsibility is transferred to the client. The TUI now detects a
    resumed thread with a paused goal and asks the user whether to `Resume
    goal` or `Leave paused`. The prompt appears only for quiet resume flows,
    so users who resume with an immediate prompt are not interrupted.
    
    <img width="544" height="111" alt="image"
    src="https://github.com/user-attachments/assets/0ac9de1c-6ee6-47ba-b223-c03c8eb4c192"
    />
  • Make thread store process-scoped (#19474)
    - Build one app-server process ThreadStore from startup config and share
    it with ThreadManager and CodexMessageProcessor.
    - Remove per-thread/fork store reconstruction so effective thread config
    cannot switch the persistence backend.
    - Add params to ThreadStore create/resume for specifying thread
    metadata, since otherwise the metadata from store creation would be used
    (incorrectly).
  • test: stabilize app-server path assertions on Windows (#19604)
    ## Why
    
    Windows can represent the same canonical local path with either a normal
    drive path or a verbatim device path prefix. The failure pattern that
    motivated this PR was an assertion diff like `C:\...` versus
    `\\?\C:\...`: different spellings, same file.
    
    That became visible while validating the permissions stack above this
    PR. The stack increasingly routes paths through `AbsolutePathBuf`, which
    normalizes supported Windows device prefixes, while several existing
    tests still built expected values directly with
    `std::fs::canonicalize()` or compared `AbsolutePathBuf::as_path()` to a
    raw `PathBuf`. On Windows, that can make tests fail because the two
    sides choose different textual forms for an otherwise equivalent
    canonical path.
    
    This PR is intentionally split out as the bottom PR below #19606. The
    runtime permissions migration should not carry unrelated Windows test
    stabilization, and reviewers should be able to verify this as a
    test-only change before looking at the larger permissions changes.
    
    ## Failure Modes Covered
    
    - `conversation_summary` expected rollout paths were built from raw
    canonicalized `PathBuf`s, while app-server responses could carry
    `AbsolutePathBuf`-normalized paths.
    - `thread_resume` compared returned thread paths directly to previously
    stored or fixture paths, so a verbatim-prefix spelling could fail an
    otherwise correct resume.
    - `marketplace_add` compared plugin install roots through `as_path()`
    against raw canonicalized paths, reproducing the same `C:\...` versus
    `\\?\C:\...` mismatch in both app-server and core-plugin coverage.
    
    ## What Changed
    
    - In `app-server/tests/suite/conversation_summary.rs`, normalize both
    expected rollout paths and received `ConversationSummary.path` values
    through `AbsolutePathBuf` before comparing the full summary object.
    - In `app-server/tests/suite/v2/thread_resume.rs`, normalize both sides
    of thread path comparisons before asserting equality. This keeps the
    tests focused on whether resume returned the same existing path, not
    whether Windows used the same string spelling.
    - In `app-server/tests/suite/v2/marketplace_add.rs` and
    `core-plugins/src/marketplace_add.rs`, compare install roots as
    `AbsolutePathBuf` values instead of comparing an absolute-path wrapper
    to a raw canonicalized `PathBuf`.
    
    ## Behavior
    
    This PR does not change production app-server or marketplace behavior.
    It only changes tests to assert semantic path identity across Windows
    path spelling variants. It also leaves API response values untouched;
    the normalization happens inside assertions only.
    
    ## Verification
    
    Targeted local checks run while extracting this fix:
    
    - `cargo test -p codex-app-server
    get_conversation_summary_by_thread_id_reads_rollout`
    - `cargo test -p codex-app-server
    get_conversation_summary_by_relative_rollout_path_resolves_from_codex_home`
    - `cargo test -p codex-app-server
    thread_resume_prefers_path_over_thread_id`
    
    Windows-specific confidence comes from the Bazel Windows CI job for this
    PR, since the failure is platform-specific.
    
    ## Docs
    
    No docs update is needed because this is test-only infrastructure
    stabilization.
    
    ---
    [//]: # (BEGIN SAPLING FOOTER)
    Stack created with [Sapling](https://sapling-scm.com). Best reviewed
    with [ReviewStack](https://reviewstack.dev/openai/codex/pull/19604).
    * #19395
    * #19394
    * #19393
    * #19392
    * #19606
    * __->__ #19604
  • Add goal core runtime (4 / 5) (#18076)
    Adds the core runtime behavior for active goals on top of the model
    tools from PR 3.
    
    ## Why
    
    A long-running goal should be a core runtime concern, not something
    every client has to implement. Core owns the turn lifecycle, tool
    completion boundaries, interruptions, resume behavior, and token usage,
    so it is the right place to account progress, enforce budgets, and
    decide when to continue work.
    
    ## What changed
    
    - Centralized goal lifecycle side effects behind
    `Session::goal_runtime_apply(GoalRuntimeEvent::...)`.
    - Starts goal continuation turns only when the session is idle; pending
    user input and mailbox work take priority.
    - Accounts token and wall-clock usage at turn, tool, mutation,
    interrupt, and resume boundaries; `get_thread_goal` remains read-only.
    - Preserves sub-second wall-clock remainder across accounting boundaries
    so long-running goals do not drift downward over time.
    - Treats token budget exhaustion as a soft stop by marking the goal
    `budget_limited` and injecting wrap-up steering instead of aborting the
    active turn.
    - Suppresses budget steering when `update_goal` marks a goal complete.
    - Pauses active goals on interrupt and auto-reactivates paused goals
    when a thread resumes outside plan mode.
    - Suppresses repeated automatic continuation when a continuation turn
    makes no tool calls.
    - Added continuation and budget-limit prompt templates.
    
    ## Verification
    
    - Added focused core coverage for continuation scheduling, accounting
    boundaries, budget-limit steering, completion accounting, interrupt
    pause behavior, resume auto-activation, and wall-clock remainder
    accounting.